LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi70g00012	ATGGGTTCTTTCTGTGCCCTAGACGAACCTCTGCAATATCCCGTTGCTCGCAGAGATGACTCAGTCGTTGACGACTACCATGGCGTCAAGATTGCCGATCCTTATCGATGGCTCGAAGATCCTGATGCGGAAGAAGTGAAAGAGTTCGTAGAGAAACAAGTTCAATTGACGAATTCCGTACTTCAAAAATGCGAAACTAGAGCGAAGCTTAATCAAACAATCACCAAGCTGTTTGACCATCCTCGTTATGATGCTCCTTTTAGGCGAGCCAATAAGTACTTTTACTTCCACAACACCGGTCTTCAGCCACAAGACATCCTCTATGTGCAGGACAGTTTGGACGGAGAACCAGAGGTTTTGCTTGATCCCAATGCCTTAAGTGAAGACGGAACCGTCTCGCTGGCATCACTGTCGGTGAGCGAAGATGCCAAGTACTTGGCTTATGGGCTTAGTTCAAGTGGTAGCGATTGGGTGACTATAAAAGTAATGCGTATTGCGGACAAGAATGTTGAGCCTGATACACTATCATGGGTCAAGTTTTCCTCTATTAGTTGGACACATGATGGCAAAGGTTTCTTTTATAGCCGCTATCCTGCACCCAAAGATGGAGAAGTAGTAGATGCAGGGACTGAGACGAATTCTAACCTTTATCATCAGCTATATTATCATTTTTTGGGTACTGATCAATCAGAAGATATTTTGTGCTGGAGAGATCTTGAAAACCCTAAATACTCGTTTGGAGGAAGTGTTACGGATGACGGGAAGTATGTCCTCCTCTATATTGGAGAAGGGTGCGATCCAGTTAACAAACTTTACTACTGTGACTTGTCTGAACTTCCTAATGGACTGGAAAGCTTTCGGAATGAAAATTCCCTCCTCCCATTTGTCAAACTTATTGATAACTTTGATGCACAATATGGAGTTATTGCAAATGATGACTCTGTGTTTACATTTCTAACTAATAAAGATGCTCCAAAATATAAACTAGTCCGAGTAGATTTGAAAGAACCAACTGCTTGGGTTGAAGTTCTCCAAGAATCTGAAAAAGACGTACTTGAGTCGGCATGTGCTGTAAACGGTAACCAACTAATAGTGAGTTACTTGAGTGATGTGAAGTATCTTCTTCAAGTAAGAGACTTAAAAACAGGTTCCTTGGTACATCAATTACCAATTGACATTGGCACAGTTTCTGAAATTTCTGCACGGCGTGAAGATAGTTTGGTTTTCATTAGCTTTACAAGCTTTCTAACTCCTGGTATCATCTATCAGTGCAACCTGGGAACAGAGATTCCTGATATGAAGATATTTCGTGAAATTGTTGTCCCTGGGTTTGATCGCTCCGGGTTTCATGTTAATCAGGTTTTCGTTCCTAGTAAAGATGGTATCAAGATCCCGATGTTCATTGTTGCCAGAAGGGATATTATTTTGGATGGTTCACACCCTTGTTTGTTATATGGATATGGTGGTTTTAACATCAGTATTACTCCATCTTTCAGTGTTAGTCGCATTGTACTCACAAGACATTTAGGTGTTGTTTTCTGCATAGCGAATATTCGTGGCGGTGGAGAATATGGGGAGGAATGGCATAAAGCAGGCTCCCTTGCAAAAAAGCAGAATTGCTTTGATGACTTCATTTCTGCAGCTGAATACCTTATATCTACTGGTTATACCCAACCTAGAAAGTTATGCATTGAAGGTGGAAGTAATGGTGGACTTCTTGTTGGCGCTTGTATAAATCAGAGACCTGATCTTTTTGGTTGTGCACTGGCTCATGTTGGTGTTATGGATATGCTACGGTTCCACAAATTTACAATAGGTCATGCTTGGACCTCGGATTATGGTTGTTCGGACAAGGAGGAAGAGTTTCATTGGCTAATCAAATATGATGTTTCTATTATCCACCATTCTAGGTACTCACCATTACATAATGTCCGGCGACCATGGGAAGAGCATCCTGATCAATCAATTCAGTATCCATCAACCATGCTGTTGACAGCTGATCATGATGATCGAGTTGTGCCGCTGCACTCATTGAAGCTATTGGCGACCATGCAATATGTCCTATGTAGTAGCTTGGAAAAAAGCCCACAGACAAACCCTATCATTGGTCGCATTGACTGCAAGGCTGGACATGGAGCAGGTCGTCCAACACAGAAATTGATCGATGAAGCTGCTGACCGGTACGGTTTTATGGCCAAAATGTTACAAGTGCATTGGATTGAATAG	2226	0.42	MGSFCALDEPLQYPVARRDDSVVDDYHGVKIADPYRWLEDPDAEEVKEFVEKQVQLTNSVLQKCETRAKLNQTITKLFDHPRYDAPFRRANKYFYFHNTGLQPQDILYVQDSLDGEPEVLLDPNALSEDGTVSLASLSVSEDAKYLAYGLSSSGSDWVTIKVMRIADKNVEPDTLSWVKFSSISWTHDGKGFFYSRYPAPKDGEVVDAGTETNSNLYHQLYYHFLGTDQSEDILCWRDLENPKYSFGGSVTDDGKYVLLYIGEGCDPVNKLYYCDLSELPNGLESFRNENSLLPFVKLIDNFDAQYGVIANDDSVFTFLTNKDAPKYKLVRVDLKEPTAWVEVLQESEKDVLESACAVNGNQLIVSYLSDVKYLLQVRDLKTGSLVHQLPIDIGTVSEISARREDSLVFISFTSFLTPGIIYQCNLGTEIPDMKIFREIVVPGFDRSGFHVNQVFVPSKDGIKIPMFIVARRDIILDGSHPCLLYGYGGFNISITPSFSVSRIVLTRHLGVVFCIANIRGGGEYGEEWHKAGSLAKKQNCFDDFISAAEYLISTGYTQPRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCSDKEEEFHWLIKYDVSIIHHSRYSPLHNVRRPWEEHPDQSIQYPSTMLLTADHDDRVVPLHSLKLLATMQYVLCSSLEKSPQTNPIIGRIDCKAGHGAGRPTQKLIDEAADRYGFMAKMLQVHWIE	741

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi70g00012	741	PANTHER	PROLYL ENDOPEPTIDASE	9	739	-	-
	Sebi70g00012	741	FunFam	Prolyl endopeptidase	402	731	-	-
	Sebi70g00012	741	FunFam	Prolyl endopeptidase	81	440	-	-
	Sebi70g00012	741	Pfam	Prolyl oligopeptidase, N-terminal beta-propeller domain	14	429	IPR023302	GO:0004252
	Sebi70g00012	741	SUPERFAMILY	alpha/beta-Hydrolases	451	685	IPR029058	-
	Sebi70g00012	741	ProSitePatterns	Prolyl endopeptidase family serine active site.	543	573	IPR002471	GO:0004252\|GO:0006508
	Sebi70g00012	741	Gene3D	-	81	440	-	-
	Sebi70g00012	741	Pfam	Prolyl oligopeptidase family	496	736	IPR001375	GO:0006508\|GO:0008236
	Sebi70g00012	741	SUPERFAMILY	Peptidase/esterase 'gauge' domain	10	429	-	-
	Sebi70g00012	741	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	481	499	IPR002470	GO:0004252\|GO:0006508
	Sebi70g00012	741	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	566	586	IPR002470	GO:0004252\|GO:0006508
	Sebi70g00012	741	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	508	532	IPR002470	GO:0004252\|GO:0006508
	Sebi70g00012	741	PRINTS	Prolyl oligopeptidase serine protease (S9A) signature	536	555	IPR002470	GO:0004252\|GO:0006508
	Sebi70g00012	741	Gene3D	alpha/beta hydrolase	22	731	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi70g00012	Sebi-Chr70	308424	314035	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi70g00012	481	613	Carbohydrate Esterase	AT5G36210	29.630	9.92e-06	47.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi70g00012	K01322		-	gmx:100776544	1356.66