Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi708g00033 ATGAGGTTCACCACTACAATCACCACCGCAGCAGCACTGATCCTCCTCTACTTTTCACTCTCCCTCCAAGCATACGACCCTGTGGATCGTTTCACCATCGACTGTGGCTCCAGCGGCAACTTCTCCGACGGGGAAAGAACATGGTCAGGGGACATAAACTCAAAGCTCTTATCTGTTCAAGACAACCCTGCAACTGCGCCTGCCACAGCAACCACACAACCTTCTTCTGTCAACAAAATCCCTTATTCCACAGCTCGCTTGTCTCACTCCCAATTCAACTACTCCTTCCCCGTCACCGCAGGCCCCAAATTCCTCCGCCTCTTCTTCTACCCTGCTTCATACCCTGGCGGCTTTGCCCGCAACAACGCCTCCTTCACCGTCATATCCAACGGATTCACACTTCTCAAAGATTTCAATGCTTCACTCAACGCAGACGCTGAAGGCGTCCCCACTATCTTGAGAGAATACACCATCAACGTGGGTGACGAACAAAGGCTTGACCTGAGCATCATTCCCAGCTCAAATTCTTATGCTTTCATCAACGGGATCGAGGTCTTATCCATGCCTGATGATCTCTACTACTACACATCATCAAATAGCGCAGGGATCAAGCCTGTGGGTCCTGGTACCCAATTCAATGTTGAAACCACTAGAGCACTAGAGAAAGGTTATAGAATCAAAGTTGGAGGGCAAACAATCTCACCCAAGAGTGACACGGGCTTGTTCAGAAGCTGGGATGGTAACGATGAAGACTATTTAAGAACACCAAGCGCAAGGGATGCTTTACCGGCTGTTTTCAGTGGTTTGAACATCACCGTGAACCCTGATTACGTGGCACCCAAGGACCTATACAGAACAGCGCGTGATATGGGCCCTAACGGCGATATCAACAAAAGTGTGAACTTGACTTGGTCGTTCCCCGTTGATTCTGGCTTCTACTACATGCTCAGGCTCCACTTCTGCGAGTTTGAGCAGAACATCACTGACATCAGCGACAGGGTGTTCTTCATTTACATACAAGGCCAGGTGGCGGAGGATCGCGCCGATGTAATGAAATGGAGTGGCAAACAAAAGGGTCTTGCCGTGCACAGAGATTACGCTGTGTCCATTCCACAGAGTAATGAAAAAAAGGTCAATCTCACGCTCCAAATGCGTCCTTACACAGATAATAAAGATACAACATACAGCGACGCCTTCCTGAACGGGCTTGAAATATTCAAACTCAGTGACGTTGGCTCTAGCAACCTAGCCGGACCCAACCCGGACCCGCTTCAGCTTCCATCAAACCCGCCAGCTCAAAGCAAAAGTAAGAGCAGCAGCGGAACGACAATAGGAGTCGTTGCGGGCGTCGTATCCGGCGTCGTTTTGGTGTCACTTGTCGTTTTCTTCATAGTCCTCAGCCGCCGTAAGAGAAGAGCCGAATCGACAACCAAGGGTAAGGATTCAAAGTCTACCGCGACTTCCAAGTGGGGCCCACTGTCGTTTTCAACGACCAAGTCAAGCAACACGCAGAACTCATCCCTGCCGTCCGATCTTTGCCGCCACTTCTCCCTCGCAGAGATCCGCGCCGCTACCAACAACTTCGACGAGCTCTTCATCGTCGGCGTTGGAGGATTCGGCCACGTGTACAAGGGCTACATCGACGGCGGTTCCATCCCTGTCGCCATAAAACGGCTCAAACCGGGTTCGCAGCAGGGTGCACACGAGTTCGTCACGGAGATCGACATGCTCTCGAAGCTTCGCCACCTCCACCTCGTTTCCCTCATTGGTTACTGTACCGAGAACAACGAGATGATCCTTGTCTATGATTTCATGGGGCGTGGTACCCTCCGCGACCATCTCTACAACACGGATAACCCTCCATTGTCGTGGAAGCAGCGCTTGCAGATTTGCATAGGCGCGGCGCGTGGGCTGCATTACCTCCATACAGGCGCGAAGCACACGATCATCCACCGTGATGTGAAAACCACGAATATCTTACTAGACGAAAAATGGGTGGCCAAGGTTTCGGATTTTGGGTTATCCAGAATTGGGCCCACGGGGATGTCCAAGGCCCATGTCAGCACTGTTGTGAAGGGAAGCATTGGGTATTTAGACCCAGAGTATTATAAACGACAGCGTTTGACAGAGAAGTCTGACGTGTACTCTTTCGGAGTGGTGTTGTTTGAGATACTATGCGCTCGGCCGCCTCTGATCCGGACTGCAGAGAAGAAACAGGTGTCGCTGGCTGATTGGGCGAGGTATTGTTATCAAAGTGGGACCCTGGGGCAGATTGTGGACCCTGCGCTGAAGGGGAAAATTGCGCCCGAGTGTTTGAGGAAGTTTGGGGAAATTGCGGTGAGTTGTTTATTGGACGATGGGACGCAGAGACCGTCGATGAACGACGTCGTTTGGATGCTGGAGTTTGCGTTGCAGCTGCAAGAGAGTGCGGAGCAGAGGGAGCATGTTGTGAGCATGGGAGTGGTTGATGATGGTGTTGTGGGAATAGGAAAGAAAGATGATAGTGATGATATTTTCAGTAGTGGGACCAGTGTGGGCCAGGTTTCTGATTTTAACAAGAGCAGTGTGATGAGCGTGACTACCAGTAGCGGAGACAATAGCATTAGCAGGGAAACTGATAAGTTGATGTCTGGGTCCATTTTCTCGGAGATTATGGACCCAACGGCACGTTGA 2673 0.5103 MRFTTTITTAAALILLYFSLSLQAYDPVDRFTIDCGSSGNFSDGERTWSGDINSKLLSVQDNPATAPATATTQPSSVNKIPYSTARLSHSQFNYSFPVTAGPKFLRLFFYPASYPGGFARNNASFTVISNGFTLLKDFNASLNADAEGVPTILREYTINVGDEQRLDLSIIPSSNSYAFINGIEVLSMPDDLYYYTSSNSAGIKPVGPGTQFNVETTRALEKGYRIKVGGQTISPKSDTGLFRSWDGNDEDYLRTPSARDALPAVFSGLNITVNPDYVAPKDLYRTARDMGPNGDINKSVNLTWSFPVDSGFYYMLRLHFCEFEQNITDISDRVFFIYIQGQVAEDRADVMKWSGKQKGLAVHRDYAVSIPQSNEKKVNLTLQMRPYTDNKDTTYSDAFLNGLEIFKLSDVGSSNLAGPNPDPLQLPSNPPAQSKSKSSSGTTIGVVAGVVSGVVLVSLVVFFIVLSRRKRRAESTTKGKDSKSTATSKWGPLSFSTTKSSNTQNSSLPSDLCRHFSLAEIRAATNNFDELFIVGVGGFGHVYKGYIDGGSIPVAIKRLKPGSQQGAHEFVTEIDMLSKLRHLHLVSLIGYCTENNEMILVYDFMGRGTLRDHLYNTDNPPLSWKQRLQICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSRIGPTGMSKAHVSTVVKGSIGYLDPEYYKRQRLTEKSDVYSFGVVLFEILCARPPLIRTAEKKQVSLADWARYCYQSGTLGQIVDPALKGKIAPECLRKFGEIAVSCLLDDGTQRPSMNDVVWMLEFALQLQESAEQREHVVSMGVVDDGVVGIGKKDDSDDIFSSGTSVGQVSDFNKSSVMSVTTSSGDNSISRETDKLMSGSIFSEIMDPTAR 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi708g00033 890 MobiDBLite consensus disorder prediction 417 439 - -
Sebi708g00033 890 Pfam Protein tyrosine and serine/threonine kinase 534 798 IPR001245 GO:0004672|GO:0006468
Sebi708g00033 890 Gene3D - 30 189 - -
Sebi708g00033 890 Gene3D - 221 409 - -
Sebi708g00033 890 CDD STKc_IRAK 534 801 - -
Sebi708g00033 890 Pfam Malectin-like domain 33 407 IPR024788 -
Sebi708g00033 890 Gene3D Phosphorylase Kinase; domain 1 491 604 - -
Sebi708g00033 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Sebi708g00033 890 FunFam FERONIA receptor-like kinase 218 409 - -
Sebi708g00033 890 FunFam Receptor-like protein kinase FERONIA 500 604 - -
Sebi708g00033 890 SUPERFAMILY Protein kinase-like (PK-like) 500 803 IPR011009 -
Sebi708g00033 890 SMART serkin_6 528 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi708g00033 890 PANTHER OS03G0124300 PROTEIN-RELATED 10 478 IPR046957 GO:0004672
Sebi708g00033 890 Gene3D Transferase(Phosphotransferase) domain 1 605 825 - -
Sebi708g00033 890 FunFam FERONIA receptor-like kinase 30 189 - -
Sebi708g00033 890 ProSitePatterns Protein kinases ATP-binding region signature. 534 557 IPR017441 GO:0005524
Sebi708g00033 890 ProSiteProfiles Protein kinase domain profile. 528 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi708g00033 890 FunFam Receptor-like protein kinase FERONIA 605 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi708g00033 Sebi-Chr708 446536 449208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi708g00033 20 890 Receptor kinase-like Gene Family AT3G51550 51.052 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi708g00033 Malectin_like 6.7e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi708g00033 - - vvo:131630062 1190.25