Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi708g00020 ATGAAGCAACCTAGCAAACCAAGACATGAGTCCCTTGATTTCTATGATATTGTCAAAGACTCAATGCATAGAGATGCCCAAGGAGTTATGGTTGCTTGGGATTCACCACGACTCTCCTATGATGGGAGGGATATACAAGATACATTCAAATCTGCTACAAAGCACACGGAACTGCCAAGGCTTTCCTTGGACAGCAGAGAAGGATCCATCAAAAGTTTCAAGGAAGGAACAAAATCTCGCAACCTTTTGAAGGGTCCAGAGAAAGGGTATGGGGGCTCCAGCACAATGCTTAAGCAGCTGCAAGAACCAGAAACTTCTAAAAGACCATCCAGTGTTGTAGCAAAGTTAATGGGACTGGAATCCTTTCCAGAATCAACCCAAACTTGTGATACTCCACAGGGAATCTCTAGCTGCACTACCAACAAAAATGAGACCTTTGCAGGATCTAGGATAAGTGATGACTACAAGCAACACCAAAGTTCAGTATCCCCAAGGACAAGCAAGGGGTCTACCTTGCTTCAGTCTAGGAGGGATGCTTCAATCACAAATGTGACACTATATTCACGATTTTCGCTGGAACCAACTCCATGGAGGCAAACTGATACAAGCCAAGGTTCACAATCACAGGCTTCCCAGAGAAATGAATCTTCAACAAGAGCATCAAACCCATCCCTCTCTGTATATGGGGAAATTGAGAAAAGGATGGCAGATCTAGAGTTCAAAAAATCTGGAAAGGATCTCAGAGCCCTTAAACAGATTCTAGAAGCTATGCAGAGATATAAAGAATCATTGGATATTACAAGAGATCAGGCTTCCAATTCTCCATCTGACAGTACTCTCAGTGAAAGCTCGAAAGTACAAAGCCCAAGAATACGACAGAAGGACCCAACATCTGCCACTGTTGAGATGTCAAATTCAACCCAGGGCCCCAGTAAGTTTTGTCCTGGTAGTCCCACAAATAGAATATTGGTTGACAAGCTTGACAGGCAAACAGCAAAAGATAGTCCAGCAATGAGACATGTCAAGGATCCTATTAGTCAGCCCTATCATTCAGTGGATAAGAGTAATAAGATGAGAACCTCAAAACGGATGCAATCCTCAAAAGTTCCTCAAGTCATCAATGGAGAAAATAGCACCAACTCCAGCAATATAGCAGAGACAAGGAGCCCAAGACTACAAAAGAAGTTTGGTTTGGAGAGGCGTTCTCCACCAACAAGCCCATCATCAGATTCCAGCAGTAACAGAAGACAACACAATAGGCAATCAATGGAATTGTCTTCCCCAATTGACAGCATGAGAAGCATTGACTCTCACAGTGATATAGAAGCCATTCACATTGATCATTCTGAAAAGATCAACAGCAACTCCATCCAGCTAAAAGGCCAGAATCAAACTAAGGCAGAAAAAGAGCTGAGCAAGGAAAGCTTTATGGCTGAAACAATAGTTACTGCAGAACAACCTAGTCCAGTGTCTGTTCTTGATGCTGCCTTCTATAGAGAAGACCCACCTTCTCCAGTTAAAAGGAAATCAGACATCTCAAGAGATTTAGATGAAGCTCCAAACACTTATGATATTAATGAGGAGAGCTCAGAAGATCTTCCTCTTTCATCCAACACCACAGAATCCAACTTCAGCAATGGAACCCGTGATGTTGACTTGAAAACTCATAAAATATTGTTAGCATCAGGGCTGCTCACTGGTCCAAGCTCTAGCCAGGCATTCCATTCATCGGGTTACCTAATTAACCCAATGTTGTTCCTCGCACTAGAGCAAATAAGGACTAACAAGATGCATTTCAATATTGAACACAGTGCCATGAAGATTGCTGAGATGAATAATCCTGAACAAATGCAAAGAAAGCTCATATTTGATGTTGTTAACGACGTTCTAGTTCAAAAGCTTATATTGGAGAGCTCTTCCACTCTGTGGTACCAGCCAAATCAGCCGGCAGGCAGAAAACTAGAAGGACAGCAGCTTTTAGATGAGCTTTGCACAGAAATTGATAAGTTACAACATAAAAATAGGAATGTCAGCCTGGTTAATGAGGATGAGAATTTGGAAAGTCTCTTGTGGGAAGATTTGATGCAACACCCCACAATATGCACAGAATACTACAGTGAGATACCAAATATTGTGTTGGATATTGAGCGGTTGATCTTCAAAGATCTGATAACTGAAGTTGTGAGAGGTGAAGTAGCTAACCATTCTGGTAAGCATTGCAGGAAACTGCAGTTCACAAGTAGGACTTCCAGATAA 2256 0.4207 MKQPSKPRHESLDFYDIVKDSMHRDAQGVMVAWDSPRLSYDGRDIQDTFKSATKHTELPRLSLDSREGSIKSFKEGTKSRNLLKGPEKGYGGSSTMLKQLQEPETSKRPSSVVAKLMGLESFPESTQTCDTPQGISSCTTNKNETFAGSRISDDYKQHQSSVSPRTSKGSTLLQSRRDASITNVTLYSRFSLEPTPWRQTDTSQGSQSQASQRNESSTRASNPSLSVYGEIEKRMADLEFKKSGKDLRALKQILEAMQRYKESLDITRDQASNSPSDSTLSESSKVQSPRIRQKDPTSATVEMSNSTQGPSKFCPGSPTNRILVDKLDRQTAKDSPAMRHVKDPISQPYHSVDKSNKMRTSKRMQSSKVPQVINGENSTNSSNIAETRSPRLQKKFGLERRSPPTSPSSDSSSNRRQHNRQSMELSSPIDSMRSIDSHSDIEAIHIDHSEKINSNSIQLKGQNQTKAEKELSKESFMAETIVTAEQPSPVSVLDAAFYREDPPSPVKRKSDISRDLDEAPNTYDINEESSEDLPLSSNTTESNFSNGTRDVDLKTHKILLASGLLTGPSSSQAFHSSGYLINPMLFLALEQIRTNKMHFNIEHSAMKIAEMNNPEQMQRKLIFDVVNDVLVQKLILESSSTLWYQPNQPAGRKLEGQQLLDELCTEIDKLQHKNRNVSLVNEDENLESLLWEDLMQHPTICTEYYSEIPNIVLDIERLIFKDLITEVVRGEVANHSGKHCRKLQFTSRTSR 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi708g00020 751 Coils Coil 250 270 - -
Sebi708g00020 751 MobiDBLite consensus disorder prediction 265 433 - -
Sebi708g00020 751 MobiDBLite consensus disorder prediction 500 548 - -
Sebi708g00020 751 MobiDBLite consensus disorder prediction 192 225 - -
Sebi708g00020 751 MobiDBLite consensus disorder prediction 501 521 - -
Sebi708g00020 751 MobiDBLite consensus disorder prediction 75 109 - -
Sebi708g00020 751 PANTHER LONGIFOLIA PROTEIN 4 743 IPR033334 GO:0051513
Sebi708g00020 751 MobiDBLite consensus disorder prediction 94 108 - -
Sebi708g00020 751 MobiDBLite consensus disorder prediction 192 228 - -
Sebi708g00020 751 MobiDBLite consensus disorder prediction 149 176 - -
Sebi708g00020 751 MobiDBLite consensus disorder prediction 362 389 - -
Sebi708g00020 751 Pfam Domain of unknown function (DUF4378) 556 726 IPR025486 -
Sebi708g00020 751 MobiDBLite consensus disorder prediction 326 340 - -
Sebi708g00020 751 MobiDBLite consensus disorder prediction 402 433 - -
Sebi708g00020 751 MobiDBLite consensus disorder prediction 267 315 - -
Sebi708g00020 751 MobiDBLite consensus disorder prediction 526 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi708g00020 Sebi-Chr708 248487 251364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi708g00020 34 733 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 32.947 2.10e-67 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi708g00020 - - gmx:100793602 1010.36