Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi708g00016 ATGGCTAAAACTGAAGGATCCAAGGATTGTGAGGGTATCCAGAGCCTTTGGAGGCTAGGACTCAATCAACCTAGCAAAGTTGTTGATTGGTTACTCAATGCAGCTAAGCATGAAATTGATGAACTCCCACCACTGCCAATCCCTCCAGGGAACTTCACCCTTGGTTATCCATCTCTTGCTACTTCTAATGATGTTAGCCAAAACAGTGCTATCTGGAAATCAAAGTCCAAAGATCAAGTTTCAGTAGAAATGGCTACTGAGAAAGAAAATTGGATGAGTAGAAGTGAAGGAGATAAACAAGGAAGCAATGAATGTTCTGTGGGAACACTTCTCAGATCTTGGTGTGTCCTACTGGAGACACAGCCATATTTCCCTTCACATGTTGCAGCAATGGAAATGGATCCAAGACAAATCAACCACTTTCAAATGCTGAGTAGTTCAAGTTCTCAAAATCTGTTGACCACCAATTCTCTCATTAATCCATCTCAACAACTCATGAGCCAGTCAGGGAAACCATTCAGCTTGGGTAGGATGACTGCTCCTAAACTCTTACATTCTCCCAATAACAGTGAAAGCCATTCCCATAGAGGCCAGGATTTTCCTTCCAAGTGA 612 0.4248 MAKTEGSKDCEGIQSLWRLGLNQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTLGYPSLATSNDVSQNSAIWKSKSKDQVSVEMATEKENWMSRSEGDKQGSNECSVGTLLRSWCVLLETQPYFPSHVAAMEMDPRQINHFQMLSSSSSQNLLTTNSLINPSQQLMSQSGKPFSLGRMTAPKLLHSPNNSESHSHRGQDFPSK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi708g00016 203 Pfam TCP family transcription factor 18 100 IPR017887 -
Sebi708g00016 203 MobiDBLite consensus disorder prediction 163 203 - -
Sebi708g00016 203 ProSiteProfiles TCP domain profile. 1 42 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi708g00016 Sebi-Chr708 215139 216083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi708g00016 18 54 TCP Transcription Factor Family AT3G02150 75.676 1.18e-13 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sebi708g00016 TCP 7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi708g00016 - - aprc:113867214 181.415