Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi707g00025 GGAGGACGTATCCAATGCACCGTGAAGAGCATTCATGTTTATTTGTTTGAAGGTGTTCTTTTGGAGGGTAGCGTCTACATGTTAGAGAACTTTTCAGTTGCACTTAACAGTGCAGAATTCAAACCAACCATGCATGAATTTAGATTGTTTTTCAAAAGGGAAACTCAAGTCCGATTGATTGAGGATTCATCCATTCCAATCAATGGTTTTTCTTTTGTTGATTTTTCTGAAATTTTGAATGAGAAGAATAAGGAGAGTCATTTGGTTGATGTTATTGGAGTTCTAACCGGGAAAGGTGAACTTATTGAATACAAGAGAGATGGAAAGGCTTGCAACTACATTGTCATTGAGTTGGAAAATTTGGAGGGCGGGATTAAGCTTTGTTGTACTCTTTGGGAGGATTTTGCACATCTGTTTTTGAAAAATTTGGAGGAAGAAAACACAAATACTTATGTTGTAGTCCTCCAATTTGCAAAAATGAAATTTTTCAAAGGTTCTGTTGGAGTATCTAACACTACTTACAACTCAAAATTGTTTGTTAATGCAAAAATTCCTGGGATTGAAGATTTTCACATGAGGTTGAAATCATCTGAGACCCAACAATGTGTCCAGTTTAGTCAGTTAATTGATGCAAAATATGTCTCTCCTGAATAA 654 0.3563 GGRIQCTVKSIHVYLFEGVLLEGSVYMLENFSVALNSAEFKPTMHEFRLFFKRETQVRLIEDSSIPINGFSFVDFSEILNEKNKESHLVDVIGVLTGKGELIEYKRDGKACNYIVIELENLEGGIKLCCTLWEDFAHLFLKNLEEENTNTYVVVLQFAKMKFFKGSVGVSNTTYNSKLFVNAKIPGIEDFHMRLKSSETQQCVQFSQLIDAKYVSPE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi707g00025 217 CDD RPA1_DBD_B_like 90 195 - -
Sebi707g00025 217 Pfam Domain of unknown function DUF223 1 86 IPR003871 -
Sebi707g00025 217 SUPERFAMILY Nucleic acid-binding proteins 70 196 IPR012340 -
Sebi707g00025 217 Gene3D - 1 63 IPR012340 -
Sebi707g00025 217 Gene3D - 64 206 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi707g00025 Sebi-Chr707 349188 350099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi707g00025 1 185 Core DNA Replication Machinery Family AT2G06510 29.843 6.74e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi707g00025 - - adu:107477146 232.261