Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi707g00013 ATGGAGGAGGAAGAGCATGAGGTGTACGGTGGTGAAATCCCCGACGTCGGAGAGATGGAGGGAGACGTCGACCCTCACCATGACCACGCCGACGTTGACATGTCCGCTGCCGACGATGACGCCGCCGTCAAGGAGTTGGATGAGATGAAGAAGCGCTTGAAGGAAATGGAAGAGGAAGCCGCGGCTCTTCGTGAAATGCAAGCCAAGGTTGAGAAGGAGATGGGCGCTGTTCAAGATCCTGCTAGTGCAGCTGCTTCACAGGCCAACAAGGAGGAGGCAGATTCTCGATCTGTTTTTGTTGGCAATGTTGATTATGCATGCACACCAGAAGAAGTGCAACAACACTTTCAATCATGTGGTACAGTGAACAGGGTTACTATCCTGACTGACAAATTTGGCCAGCCTAAAGGTTTTGCTTATGTGGAATTCCTTGAGACTGAAGCTATTCAAGAGGCTCTTCTACTGAATGAATCTGAATTACATGGCCGTCAATTGAAGGTTATGCCTAAGAGGACCAACGTTCCTGGAATGAAACAATATCGTCCTAGGCGCTTTAATCCTTACATGGGACATCAATTCAGGAGGCCATATCCTCCTCCTTACTTTTACTCCCCTTATGGATATGGAAAGTTTCCCAGGTTTAGAAGGCCTGGTCGGTACATGCCATACTATTAG 675 0.4844 MEEEEHEVYGGEIPDVGEMEGDVDPHHDHADVDMSAADDDAAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASAAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLETEAIQEALLLNESELHGRQLKVMPKRTNVPGMKQYRPRRFNPYMGHQFRRPYPPPYFYSPYGYGKFPRFRRPGRYMPYY 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi707g00013 224 Gene3D - 34 168 IPR012677 -
Sebi707g00013 224 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 24 184 - -
Sebi707g00013 224 MobiDBLite consensus disorder prediction 72 95 - -
Sebi707g00013 224 FunFam Polyadenylate-binding protein 1 34 168 - -
Sebi707g00013 224 MobiDBLite consensus disorder prediction 19 35 - -
Sebi707g00013 224 CDD RRM_II_PABPs 97 167 - -
Sebi707g00013 224 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 96 172 IPR000504 GO:0003723
Sebi707g00013 224 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 98 166 IPR000504 GO:0003723
Sebi707g00013 224 Coils Coil 39 73 - -
Sebi707g00013 224 SMART rrm1_1 97 168 IPR000504 GO:0003723
Sebi707g00013 224 MobiDBLite consensus disorder prediction 1 35 - -
Sebi707g00013 224 SUPERFAMILY RNA-binding domain, RBD 86 191 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi707g00013 Sebi-Chr707 192744 202729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi707g00013 93 167 Eukaryotic Initiation Factors Gene Family AT2G36660 35.526 3.19e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi707g00013 K14396 - fve:101314216 341.273