Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi706g00021 ATGATGCTTCACCCATACCCACTAAACCTTTCACACTCCCTTCACCCATTCTCAACCTTTCCTCCTCAACACCAAGCTCAACCCTTGTTCTCCACCATCAAATCACAACCACCAAACAAGGCATGTTTCCAACCCTACATTCGTGCATTCTTCAAGTGCCACTGCAGCAGCTCCTCCGCCAGTCTTGACACTGAATTCGCGAAGCTCGTTTCTTTTTTTCAAGAATTAGGGATTGGTTTTGAGGAAACACAAGTGTTCTTGCTCAATAACCCTGAACTTAGTTTAGTTTCAGTAGATTCATTGCATGCTAGGGTCCTTTCTTTACAGTCTTTGGGGTTGGATAGGGTTACCATGTATCAATTGGTTACAAAGCGCCCAACTGTGCTAACAGATAAGGAAATTGTTCCCTTGTTAAGCTTTTTGAGAAATGAACTAGAAGGACAGCTTGAGCAAGCACAGATAGAGCGCCTTTTATCTCTTGAACCAAAATTCTTGGTGGATTTTCCTCAGAAGGTTAAACTGCTTGTTGAAAGAGGTGTTCCTGCTGATAAAATTGTACATGTGCTCAACAAAGTTCATTTGCAAAAGGCACTGTGTGGCAAGTCCATGGATGAAATTGACAGATTTATAACTTTCTTGGAACCCTTTGGTAGCATTAGTTTGATCCTGAGGCTCCCTACAATTCTCAAGTTTGATTTAGACAAGCAGCTCATTCCAAGAATCAAAGTACTGGTGGAACTTAGTAATGGAGATAAGTTTGGTGTTGCCAAAGTGCTCCTTAGATACCCTGCAATCTTGAACTATACTGTGAAACATGTGGAGGGACATGTACAGTTCTTGAGGTCTTTTGCAAATCTTGATGACAAACAAATATTTAGAATAATGTCAATATTTCCAGCTGTTGTCACTATTAGCAGAGAGAGGAAACTGCGTCCTAGAATACAATTTCTCATGGAATGTGGGACAAGCTGTGAGAACATGCAAAAGGTGATAAGTCTATTCTTGAATTATGGGTTTTCATGTGAAGACATTATTGCTATGAGTAAGAAGCAGCCACAGATACTGCAGTATAATCATACTTCTTTAGAGACGAAGATGAACTACTTGATAGAGGACATGGATCGGGACATTAAGGAGTTATTGGTTTTTCCTGCATTTCTTGGCTACAAGTTGGATGACAGAATTAAGCCTAGATATGAGATAAGGAAGAGTACAAAGGGGGGACAAATGTCTCTCAATAAGCTTCTAACTGTTTCAAGTGAGATGTTTACTGACAAGAGAAAAAAGGCCTCTGCTCTAGCATCTGAATCGTGA 1314 0.4033 MMLHPYPLNLSHSLHPFSTFPPQHQAQPLFSTIKSQPPNKACFQPYIRAFFKCHCSSSSASLDTEFAKLVSFFQELGIGFEETQVFLLNNPELSLVSVDSLHARVLSLQSLGLDRVTMYQLVTKRPTVLTDKEIVPLLSFLRNELEGQLEQAQIERLLSLEPKFLVDFPQKVKLLVERGVPADKIVHVLNKVHLQKALCGKSMDEIDRFITFLEPFGSISLILRLPTILKFDLDKQLIPRIKVLVELSNGDKFGVAKVLLRYPAILNYTVKHVEGHVQFLRSFANLDDKQIFRIMSIFPAVVTISRERKLRPRIQFLMECGTSCENMQKVISLFLNYGFSCEDIIAMSKKQPQILQYNHTSLETKMNYLIEDMDRDIKELLVFPAFLGYKLDDRIKPRYEIRKSTKGGQMSLNKLLTVSSEMFTDKRKKASALASES 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi706g00021 437 FunFam - 49 248 - -
Sebi706g00021 437 PANTHER CGI-12 PROTEIN-RELATED 58 202 IPR003690 GO:0003690|GO:0006355
Sebi706g00021 437 Gene3D Transcription termination factor 3, mitochondrial 46 252 IPR038538 -
Sebi706g00021 437 Gene3D Transcription termination factor 3, mitochondrial 253 433 IPR038538 -
Sebi706g00021 437 SMART mt_12 84 114 IPR003690 GO:0003690|GO:0006355
Sebi706g00021 437 SMART mt_12 292 323 IPR003690 GO:0003690|GO:0006355
Sebi706g00021 437 SMART mt_12 345 376 IPR003690 GO:0003690|GO:0006355
Sebi706g00021 437 SMART mt_12 48 79 IPR003690 GO:0003690|GO:0006355
Sebi706g00021 437 SMART mt_12 219 250 IPR003690 GO:0003690|GO:0006355
Sebi706g00021 437 SMART mt_12 377 409 IPR003690 GO:0003690|GO:0006355
Sebi706g00021 437 SMART mt_12 256 287 IPR003690 GO:0003690|GO:0006355
Sebi706g00021 437 Pfam mTERF 71 332 IPR003690 GO:0003690|GO:0006355
Sebi706g00021 437 Pfam mTERF 324 423 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi706g00021 Sebi-Chr706 315653 317208 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi706g00021 mTERF 5.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi706g00021 - - pvu:PHAVU_009G045200g 470.314