Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi706g00014 ATGACTAATACTATGATGAATGAGAGTAGTGTGAGGTTACTGCCACTGGAGATAATAGCTGAAATACTCTCATGGTTACCGGTTGAGTCTATTCTACGCTTCAGCTGCGTTTGCAAGTCATGGTACTCACTCATCTCACACTCTCAATTCATCAACCTTCATCTTTCTCGCTCCCTCAAACTCAACCATGGCATGCTTATCTTTGAACAACCCCGTTACGAGCATGGAATGCTCTATCTGACACCCTTTTCCGGTGATGCCATTTCGAGCTACCCCTTGAGGATTCCCCTTCCCTTTCGAGAGGATCGTGTTCGCATGTGTCATTGCGATGGCTTGGTTTTCTTCACTGCAGCTTGGGCCAATGTCTGTGTGCTCTGGAACCCTTTACTGCGGAAGCAAAAGTCGTTGACTTTGCCGCGATTCGAGGGTCCTGGATTTCCGGGTAGTGTGATTTTGGTGGATTTTGGATTTGGGGTTGACATGGTCAGTGGTGACCATAAGATTGTTAGGCTTGTGCTTTATGCTGAATGGTATAAGGGTGACTATTTGAAGCATAATTTTTGGACCTCTGAAGTAAAGGTTTATTCTTTTTGTACAAATTCATGGAGAAGGGTTCCTGATTTGCCTTTCAATGATTTAAAGCTCTGTACTCCCTCAATTCATGTTAATGGTGCTCTACACTGGTTGGTTTGTGACAGGGATTCAAGTGAGTCTATCAGATTTGTTGTTGCTTTTGATCTTGCAAATGAAGAATTTCATAACCTTCTTGTTCCAAGTAATTTGGAACATGGGTCTCTCTCGAGTTTGGCTGTTCTGGATGGCTGTCTCTGCTTATGCCTTAATGATAATGCAAAGGCTCGTCAAGAGGTTTGGTTGATGAAGGAGTATGGAGTGCATGATTCTTGGTGTAGGCTTTTGGTTTTTGAAAATTGTGAATTGCCTTGCAGGCCATTAGTTTTATCCAAGACTAATGCCAAGGTGCTTGTGGAACAGGACTCTAAGAAACTGTTTTGGTATGATTACATCAATGAGGAAATTGAAAAGGTCATGATTAGTGATATGCCTTTTGCCTTTCAAACAACTGTCTCTGCTGGAAGCCTTCTTTTGCATGATGGAGATGCTGTTAAGGCTGCTCAATTATAG 1143 0.4261 MTNTMMNESSVRLLPLEIIAEILSWLPVESILRFSCVCKSWYSLISHSQFINLHLSRSLKLNHGMLIFEQPRYEHGMLYLTPFSGDAISSYPLRIPLPFREDRVRMCHCDGLVFFTAAWANVCVLWNPLLRKQKSLTLPRFEGPGFPGSVILVDFGFGVDMVSGDHKIVRLVLYAEWYKGDYLKHNFWTSEVKVYSFCTNSWRRVPDLPFNDLKLCTPSIHVNGALHWLVCDRDSSESIRFVVAFDLANEEFHNLLVPSNLEHGSLSSLAVLDGCLCLCLNDNAKARQEVWLMKEYGVHDSWCRLLVFENCELPCRPLVLSKTNAKVLVEQDSKKLFWYDYINEEIEKVMISDMPFAFQTTVSAGSLLLHDGDAVKAAQL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi706g00014 380 ProSiteProfiles F-box domain profile. 8 53 IPR001810 GO:0005515
Sebi706g00014 380 Gene3D - 1 50 - -
Sebi706g00014 380 SMART fbox_2 14 54 IPR001810 GO:0005515
Sebi706g00014 380 NCBIfam F-box protein interaction domain 106 332 IPR017451 -
Sebi706g00014 380 PANTHER BNACNNG10540D PROTEIN 4 353 - -
Sebi706g00014 380 SUPERFAMILY F-box domain 5 60 IPR036047 GO:0005515
Sebi706g00014 380 Pfam F-box associated 220 345 IPR006527 -
Sebi706g00014 380 SUPERFAMILY Galactose oxidase, central domain 106 356 IPR011043 -
Sebi706g00014 380 CDD F-box_AtFBW1-like 12 50 - -
Sebi706g00014 380 Pfam F-box domain 14 47 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi706g00014 Sebi-Chr706 202627 203769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi706g00014 173 309 Carbohydrate Esterase AT1G25141 20.134 3.56e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi706g00014 - - cave:132178594 216.853