Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi706g00008 ATGTCACAGCCAAGGCAAAACAAGATGATGAGTCCAAACTTTGCCAAACAAGTTGGTGGTGACACAACCTATACTAAGATCTTTGTTGGAGGATTAGCTTGGGAGACTAAGAGAGACACACTGAAACGCTATTTTGATCAATTTGGAGAGATCTTAGAAGCTGTTGTCATCACTGACAGAAACACTGGAAGATCAAAAGGATATGGCTTTGTGACCTTTAAGGACCCAAATTCTGCAATCATTGCTTGCCAGAATCCCTATCCTGTGATTGATGGAAGGAGAGCTAATTGTAATATTGCAGCTCTAGGTGCACAAAAATCTGATCCATCAATAACAGGAAGACAGAAATTCAGTAGCCCTTCATGGAATACTGTACCAATTCAATTTCAAGGCACCTCCACTTATTATAATCAGAATATACCACAGTATACAATTCCCTATCCAGCCTACAGGTATCCTGGTTATCCTCGCCCACAAGACATTTATGAAATGAATTACTATAATGCATATGGTGGACAAGGACAACAGTTTCCATTTCGCTGGGTTCCAGCATATTGCCAACCTTTTTATGGTCTTAGTAGACAGTTTGTTCCACCAGCTTATGTGAAAAAGACACAACTCCCTGATATGTCACCACAGGAGTTCACAGTTGTTGGCATATCAGAACCTATTTCACATTCTCCTTCAATTTCAAGCACTGAAACAGGAGCTGCAACAGGAGTGGTAGGATCACCCCAAGAACAGGAATCTTCAGCTTAA 759 0.4084 MSQPRQNKMMSPNFAKQVGGDTTYTKIFVGGLAWETKRDTLKRYFDQFGEILEAVVITDRNTGRSKGYGFVTFKDPNSAIIACQNPYPVIDGRRANCNIAALGAQKSDPSITGRQKFSSPSWNTVPIQFQGTSTYYNQNIPQYTIPYPAYRYPGYPRPQDIYEMNYYNAYGGQGQQFPFRWVPAYCQPFYGLSRQFVPPAYVKKTQLPDMSPQEFTVVGISEPISHSPSISSTETGAATGVVGSPQEQESSA 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi706g00008 252 MobiDBLite consensus disorder prediction 225 252 - -
Sebi706g00008 252 CDD RRM_RBM24_RBM38_like 25 100 - -
Sebi706g00008 252 SUPERFAMILY RNA-binding domain, RBD 3 106 IPR035979 GO:0003676
Sebi706g00008 252 Gene3D - 1 115 IPR012677 -
Sebi706g00008 252 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 25 102 IPR000504 GO:0003723
Sebi706g00008 252 SMART rrm1_1 26 98 IPR000504 GO:0003723
Sebi706g00008 252 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 27 84 IPR000504 GO:0003723
Sebi706g00008 252 PANTHER BOULE-RELATED 11 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi706g00008 Sebi-Chr706 82528 84043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi706g00008 21 101 C2H2 Transcription Factor Family AT2G19380 41.975 9.72e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi706g00008 - - gmx:100788634 404.06