Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi704g00013 ATGGCCTCTGTGTTTGATTCTTTGAAGAATATCCATCCTGGAAGACAGACATGGCGACTGAAGGTTAGGGTTGAGCGCATGTGGGAGATGTTCCCCTTAGATGAGCCATCCAAGCCTTTTTCCATTGAAATGGTGCTTTTGGATGCTGAGTATGCCAAAGTAAAGAGATTCCGAGGTGTTGTTGTTTTACAAAATGTGCTCAATACAACACATATTCTTTGGAATCCTGACATATCTGAGGTTGTTGAATTTAGGCATAGCATTGTTTCAAGGGGTGTGGACATTTGTGGTCCCCTCGAAACCATAGAAGATCACACCGCGAGTGCTTCATCAGGCGAGGAATTCTTGCATATGTATCCTAGAAAGAGTATAAGTGAACTCAATAACACTGAAGACGATGGGCTTTTCATCATTCTTGCAACTATAGTCACGGTCCTGACTGACAACAACTGGTGGTACTCTGTATGCAAGTGCAACAGAGCTGTCATAGTTGATGGGGATAGTTACTATTGTCCCAATTGTACGTGTACTGCGACTGATGTAACCCTGAGATATAAGTTGAAGGTTGAAGTGTTTGATGGAGATGACACAACTGCTTTTGTCATGTTTGATAGTGACGCTGAGTTGGTCACTGGTGTTTCGTGTTTTGTGCTTCTAGATGTTTACAAGGAGAGTGGAATCGACCAAATCCCACCAGAACTCGAAGACTTAGGTGGTAAGGAGCTCCTCTTCAAGGTGGAGAAAGCTGATGACTATGCATTCAAATACGATGACACATTTAAGGTGAAGAGGGTTTACATTGTCAGCGAAATCATTGGGCACTACACGGACATGAAGAAGATATCAACCCCCAAAGTTAACAAGTTCCATATTCTATTTCCTAGCCTCGATGACATCCCTGAAGATGTCGCGGACGGTAAACGGGGCGTAGATAACCGTGCTGCTGACAATGATGACGGTGGCTCACACTTCAGTGTTGCTGATTATTTGTCTGATCAGGCTGGTTGCCCTATTGATACACCTGTTGATGCAACAAACGAGGCTAGCAGCTCCCGCATGGTGAAGGAACGTGGCAAAGGAAATAAATGA 1089 0.4408 MASVFDSLKNIHPGRQTWRLKVRVERMWEMFPLDEPSKPFSIEMVLLDAEYAKVKRFRGVVVLQNVLNTTHILWNPDISEVVEFRHSIVSRGVDICGPLETIEDHTASASSGEEFLHMYPRKSISELNNTEDDGLFIILATIVTVLTDNNWWYSVCKCNRAVIVDGDSYYCPNCTCTATDVTLRYKLKVEVFDGDDTTAFVMFDSDAELVTGVSCFVLLDVYKESGIDQIPPELEDLGGKELLFKVEKADDYAFKYDDTFKVKRVYIVSEIIGHYTDMKKISTPKVNKFHILFPSLDDIPEDVADGKRGVDNRAADNDDGGSHFSVADYLSDQAGCPIDTPVDATNEASSSRMVKERGKGNK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi704g00013 362 PANTHER OS03G0429900 PROTEIN 68 250 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Sebi704g00013 362 SUPERFAMILY Nucleic acid-binding proteins 119 247 IPR012340 -
Sebi704g00013 362 Gene3D - 104 274 IPR012340 -
Sebi704g00013 362 MobiDBLite consensus disorder prediction 337 362 - -
Sebi704g00013 362 Pfam Replication factor-A C terminal domain 137 250 IPR013955 -
Sebi704g00013 362 CDD RPA1_DBD_C 122 265 IPR047192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi704g00013 Sebi-Chr704 424076 426635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi704g00013 53 246 Core DNA Replication Machinery Family AT5G08020 25.490 8.22e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi704g00013 - - lja:Lj1g3v3385890.1 219.164