Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi704g00009 ATGGAGTGGAATACAAAATCTCTCGGGCAATGGGACTGGGAGCACTTGTTCTTCTTGAATACAAAAGCAACCGAAAATCCCAGATTACAACCTATTGATTGGAGTGGTGAGGCAGATCGAGAAATCAATGTTGGGGTGTTGTATCCATCAGGTGGTAGTGGTTGTTCTGGTTCTGAATTGATACATGCTACTTCCTCAAGGTGCTCAAAATCAGCTTCCAACAATTCATCATCAAATGGGGATAGTAAGACATCTATGTTAACCCTGGAAGGTTCTCAAGATGATTCAAGTGGTAAGAAAGAATTGTCCAAAGGAGAGCCAGTTGAAACTTCTACAGCAGCAGAGCCCTCTTCTGTCTCTGGTGAACCATTGCTCACTCTAAAGCTTGGTAAAAGATCATACTTTGAGGATGTTTGTGCAGGAAATGATTCCAGGAAACCATCTTCCTCTGTGGTTCCCATTTCATCTGGAAAGAAATGCAAATCCAATAGTCAGAACTTACAACTTCCAACCTGCCAGGTGGAAGGCTGTGGCCTTGATCTGTCATCTGCTAAAGATTACCATCGCAAACATAGAGTTTGTGAAAATCATTCCAAATCCCCTAAGGTGGTTGTAGCTGGTTTAGAACGTCGATTTTGCCAGCAATGTAGCAGGTTCCATGCTCTGTCTGAGTTTGATGATCAAAAAAGAAGCTGCAGACGACGTCTTTCAGATCACAATGCAAGGCGCCGCAAGCCTCAACCTGAAGCAGTGCAATTAAATCCATCAGCTCTGTCTTCATCACCCTATGATTCGGTTTTGAGCTGTGCTGATGAGGATGGGAGGCAAATGATTACTCCATTTGCATTTTCAAGAACTGCTACAAATTTAGCATGGCCAGACACACACAGCAGCAAGCTCCCCCAGACAAAAGATTTTCTCCTGAAGCCTGCAAAAGCCTTCAATAAGATACCAAATATTGTCACTATGCTTTCTGATGATTCCGGTGGTCTTCTTACATCCAAAGGCATAGGAATCAAGAACACTGTTCCAGGTATGGAAGATCGCACTACTACCTCATCTGCTCCAAATGCAACAGCACAAGATGTTAACCGTGCTCTCTCTCTTCTGTCAACCAATTCATGGGGTGCATACCAGACTAAGTCCCTTTCTCAAGAACACTCCAACAGGACAACAGGTACCACTCAGTCCATAACACACCCAATGACTCAGCGCTTAGCCTTTCCTTCATCAGAATATTGGCACAGTGATCAACAACTGGGAAACTCCAGCATCTGTATCTCATACTCAGATTGTGATAATAGCAACCGCTTTCAAGACTTTCAGCTGTTGAGTGCACCCTTTGAGTCAGGTTTTCCTTGCAACCAGCTGGATTAA 1377 0.4379 MEWNTKSLGQWDWEHLFFLNTKATENPRLQPIDWSGEADREINVGVLYPSGGSGCSGSELIHATSSRCSKSASNNSSSNGDSKTSMLTLEGSQDDSSGKKELSKGEPVETSTAAEPSSVSGEPLLTLKLGKRSYFEDVCAGNDSRKPSSSVVPISSGKKCKSNSQNLQLPTCQVEGCGLDLSSAKDYHRKHRVCENHSKSPKVVVAGLERRFCQQCSRFHALSEFDDQKRSCRRRLSDHNARRRKPQPEAVQLNPSALSSSPYDSVLSCADEDGRQMITPFAFSRTATNLAWPDTHSSKLPQTKDFLLKPAKAFNKIPNIVTMLSDDSGGLLTSKGIGIKNTVPGMEDRTTTSSAPNATAQDVNRALSLLSTNSWGAYQTKSLSQEHSNRTTGTTQSITHPMTQRLAFPSSEYWHSDQQLGNSSICISYSDCDNSNRFQDFQLLSAPFESGFPCNQLD 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi704g00009 458 MobiDBLite consensus disorder prediction 67 93 - -
Sebi704g00009 458 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 65 404 IPR044817 GO:0003677
Sebi704g00009 458 ProSiteProfiles Zinc finger SBP-type profile. 169 246 IPR004333 GO:0003677
Sebi704g00009 458 MobiDBLite consensus disorder prediction 67 122 - -
Sebi704g00009 458 MobiDBLite consensus disorder prediction 236 258 - -
Sebi704g00009 458 FunFam Squamosa promoter-binding-like protein 14 163 233 - -
Sebi704g00009 458 Pfam SBP domain 172 245 IPR004333 GO:0003677
Sebi704g00009 458 Gene3D - 162 233 IPR036893 GO:0003677|GO:0005634
Sebi704g00009 458 SUPERFAMILY SBT domain 170 251 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi704g00009 Sebi-Chr704 255709 258530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi704g00009 1 417 SBP-box Gene Family AT5G43270 39.907 4.97e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Sebi704g00009 SBP 7.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi704g00009 - - gmx:100781289 678.707