Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi703g00014 ATGAAGTTCCCAGTCTTTGTTGTTCCATTTGTTCTGCTAAGCTTCATACTATCTCTCTTTGGCTTGATTTTAGCTGACTTGAACTCTGACAGACAAGCCCTCCTTGAGTTTTCTTCTAGTGTTCCACATGCTCCAAGGTTAAACTGGAATGAGACTACTCCAATTTGCACTTCATGGGTTGGTGTGACTTGCAATCCAAATGAGACTCGAGTAATTGGCATCCATCTTCCAGGGGTTGGATTCAAGGGCTCCATTCCAAATAATAACCTAGGAAAACTTGATGCTCTCAGAATTCTGAGCCTTCAATCCAATGGCCTTAGTGGAAATCTTCCTTCTGACATTCTCTCCATTCCTTCACTCCAATATGTAAACCTGCAGCACAATAACTTCTCAGGCCTAATTCCTTCCTCTGTCTCCCCTAAACTCATAGCATTGGATATTTCCTTTAACTCCTTCTCTGGAAGTATCCCACCTACATTTCAGAATCTCAGAAGACTGACCAGCTTGTATCTCCAAAACAATTCCATCTCTGGAACCATCCCTGACTTCAACCTTCCAAGGCTCAAATATTTGAATTTGAGCTATAATAACTTCAATGGCTCAATTCCAAATTCCATCAATCAATTCCCCTATACTTCTTTTGTTGGGAACTTTCTCTTATGTGGGCCACCTCTCAATCTTTGTTCTGCAATCTCCCCTTCTCCATCTCCTTCTCCTGTTTACCAACCACTCTCTCCATCAACTTCCCAAAATCAAAATGCTACCACTTCAAAGAAATTCTTTGGCCTTGCTTCTATCCTTGCTCTAGCAGTTGGAGGCTGTTCCTTCCTCTCTCTCCTAGTTTTGGTGATCTTTGTATGCTGTTTGAAGAGAAAAAAGAGTAAAAGCAGTACTAGAGGTATACTGAAAGGAAAGGCATATTGTGCTGGAAAGGCTGAGATTTCAAAGAGTTTTGGGAGTGGGGTGCAAGAGGCTGAAAAGAACAAATTGTTCTTCTTTGAAGGTTGCTCTTATAGCTTTGACCTTGAAGATTTGTTGAAGGCTTCAGCTGAAGTTCTTGGAAAGGGGAGCTATGGAACAACATACAAGGCTGCATTAGAGGAGGGAACAACAGTTGTAGTTAAAAGGTTGAGGGAAGTTGTGGTTGGAAAGAAGGAGTTTGAGCAACAGATGGAGGTTGTGGGAAGATTTGGACAACACCCCAATGTGTTACCCCTTCGAGCTTATTACTATTCCAAAGATGAGAAACTTCTAGTTTATAACTACATGCCAGGAGGCAGCATGTTTTCCTTGTTGCATGGAAGAACTCCATTAGTCTGGGAATCAAGAATGAAGATTGCACTTGGAGCTGCAAAGGGAATTGCTTCCATTCACACAGAGGGTGGTCCAAGGTTTACACATGGCAACATCAAGTCATCCAATGTGCTCATAACCCAAGAAGTTGATGGTTGCATCACTGATGTTGGACTAACTCCTCTAATGAACACCCCATCAACCATGTCAAGAGCCAATGGCTATTGTGCTCCAGAAGTGGCTGAGTCAATGAAGATCACACATAAGTCTGATGTTTACAGCTTTGGGGTGGTCCTTCTTGAAATTCTTACATGGAAGACCCCATTAGGATATGCTGGGTTTAATGACATGGTTGATCTTCCAAGGTGGGTGAGGTCTGTGGTTCGTGAGGAATGCACAGCTGAAGTTTTTGATAAGGAACTGTTGAGAGGGCAATATGTAGAAGAGGAGATGGTGCAGATGCTTCAGATTGCACTGGCATGTGTAGCAAAGGTTGCAGATAATAGGCCAACAATGGATGAAGCTGTTAGAAACATAGAGGAAATTAGGTACCCTGAGTTGAAGAACAGTACATCCTCTGAGTCTGAATCTAATGTACAAACACCATGA 1902 0.4238 MKFPVFVVPFVLLSFILSLFGLILADLNSDRQALLEFSSSVPHAPRLNWNETTPICTSWVGVTCNPNETRVIGIHLPGVGFKGSIPNNNLGKLDALRILSLQSNGLSGNLPSDILSIPSLQYVNLQHNNFSGLIPSSVSPKLIALDISFNSFSGSIPPTFQNLRRLTSLYLQNNSISGTIPDFNLPRLKYLNLSYNNFNGSIPNSINQFPYTSFVGNFLLCGPPLNLCSAISPSPSPSPVYQPLSPSTSQNQNATTSKKFFGLASILALAVGGCSFLSLLVLVIFVCCLKRKKSKSSTRGILKGKAYCAGKAEISKSFGSGVQEAEKNKLFFFEGCSYSFDLEDLLKASAEVLGKGSYGTTYKAALEEGTTVVVKRLREVVVGKKEFEQQMEVVGRFGQHPNVLPLRAYYYSKDEKLLVYNYMPGGSMFSLLHGRTPLVWESRMKIALGAAKGIASIHTEGGPRFTHGNIKSSNVLITQEVDGCITDVGLTPLMNTPSTMSRANGYCAPEVAESMKITHKSDVYSFGVVLLEILTWKTPLGYAGFNDMVDLPRWVRSVVREECTAEVFDKELLRGQYVEEEMVQMLQIALACVAKVADNRPTMDEAVRNIEEIRYPELKNSTSSESESNVQTP 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi703g00014 633 ProSiteProfiles Protein kinase domain profile. 347 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi703g00014 633 FunFam Nuclear pore complex protein NUP107 27 182 - -
Sebi703g00014 633 Gene3D Ribonuclease Inhibitor 28 140 IPR032675 -
Sebi703g00014 633 SUPERFAMILY Protein kinase-like (PK-like) 351 610 IPR011009 -
Sebi703g00014 633 FunFam pollen receptor-like kinase 1 315 422 - -
Sebi703g00014 633 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Sebi703g00014 633 Pfam Leucine Rich Repeat 187 206 IPR001611 GO:0005515
Sebi703g00014 633 Pfam Protein kinase domain 351 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi703g00014 633 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 423 625 - -
Sebi703g00014 633 ProSitePatterns Protein kinases ATP-binding region signature. 353 384 IPR017441 GO:0005524
Sebi703g00014 633 Gene3D Phosphorylase Kinase; domain 1 312 422 - -
Sebi703g00014 633 Gene3D Ribonuclease Inhibitor 141 229 IPR032675 -
Sebi703g00014 633 PANTHER OS05G0588300 PROTEIN 11 626 - -
Sebi703g00014 633 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Sebi703g00014 633 Gene3D Transferase(Phosphotransferase) domain 1 423 632 - -
Sebi703g00014 633 SUPERFAMILY L domain-like 39 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi703g00014 Sebi-Chr703 320342 323040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi703g00014 15 631 Receptor kinase-like Gene Family AT5G58300 58.413 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi703g00014 Pkinase 1.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi703g00014 - - vum:124839146 960.674