Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi702g00019 ATGTCCCTGGAAGACTCTCTAAGATCTCTCTCCCTTGACTACCTCAACCTTCTCATCAATGGCCAAGCCTTCAGTGACGTCACCTTCCAAGTCGAGGGTCGTTTGGTCCACGCTCATCGCTGCATCTTAGCAGCCAGGAGCCTCTTCTTCCGGAAATTTTTCTGTGGGCCTGACCCGCCTTCTGGGCTCGACCCGACAGGAGGGAACTCTCGGGCCGGGCCTGGGACAGCCAGGCCCGGCGTGATACCGGTGAACTCGGTTGGGTACGAGGTGTTCTTGCTCCTCCTGCAGTTTCTCTACAGTGGACAAGTCTCTATTGTCCCTCAGAAGCATGAGCCAAGGCCTAATTGTGGTGAGAGAGGATGCTGGCACACGCATTGCACCTCAGCCGTTGATCTTGCCCTTGACACCCTCGCTGCCGCTAGATACTTTGGCGTTGAACAGCTGGCATTGCTCACTCAAGTTTGTTACTAA 474 0.5527 MSLEDSLRSLSLDYLNLLINGQAFSDVTFQVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPTGGNSRAGPGTARPGVIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQVCY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi702g00019 157 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 154 IPR044284 GO:0099402
Sebi702g00019 157 SMART BTB_4 25 155 IPR000210 GO:0005515
Sebi702g00019 157 Gene3D Potassium Channel Kv1.1; Chain A 3 156 IPR011333 -
Sebi702g00019 157 Pfam BTB/POZ domain 16 109 IPR000210 GO:0005515
Sebi702g00019 157 ProSiteProfiles BTB domain profile. 25 108 IPR000210 GO:0005515
Sebi702g00019 157 SUPERFAMILY POZ domain 8 152 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Sebi702g00019 BTB 6.4e-16 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi702g00019 K14508 - cpap:110822594 263.462