Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi702g00012 ATGTTAAGTCAAAACAAGAGGATGGTGTTAGTTTTGCTATACAATTGGCAAGTTCAATTGTGTTGCCAATGGCTTTGCAACATTATTGCCAAATTTGGGGAAGGTGCCAAGCTCTCAGCAAAGGATATTGCAGTTCATATTGGTACCAATAACCCAGAAGCACCCATGATTCTAGATCGTCTTCTTAGGTTCTTGGCTAGTTATTCAGTGCTGCAATGTTGTATCCTTGAAGATACACAGAGGCTTGGGGCTACTCAGTGTTTTTATAGTCTAACCTCTGGATCCAAATATTTTGTGAATGATGTTGATGGAGTGTCACTTGGCCCCTTCTTGGCTTTACTTACGGACAAGGTTTTCTGCAAAACCTGGGTTGAACTAAAAGGAGTAATCCAAGAAGGAGGTACACCATTCAATAAGGCTTATGGTATGCATTTCTTTGGGTATACAAGGTTAGATCCTAGGTTTAATGAGGTTTTCAACAACGGTATGCTTAGTTCCAGCACCATAATTATGAAGACGATACTTGAACTCTACAGTGGTTTTGAACATATCAATAGGCTGGTGGATGTTGGTGGTGGTCTTGGGATCAATGTTAAATTGATCACTTCCAAATACCCTCACATAGAGGGTGTTAATTTTGACTTGCCTCATGTCATAAAATACGCCCCCATTTATACCGGTGTGGAGCATGTGAGCGGAGATATGTTTGAGAGCGTTCCTAATGGGGATGCCATTTTTATGAAGTGGATACTTTATGATTGGAATGATGAGTGTTGCATAAAGCTCTTGGAGAATTGCTACAAGGCTATTCCTGATGATGGAAATGTTATTGTTGTTGACACAATTCTTCCCATTGTGCCTGGGACAACATCTACTGACAAGGTTGTCTCTACAAGTGATCTCTTTATGTTGACTCTAACCACAGGAGGGAGAGAACGAACGCAACAAGAATTCATGGCATTGGCAATAAGGTCTGGATTTTGCGGCATCAAAGTCGTATGTTGCGTTGCTAGCTTTTGTGTTATGGAGTTCTTCAAGTAG 1041 0.4083 MLSQNKRMVLVLLYNWQVQLCCQWLCNIIAKFGEGAKLSAKDIAVHIGTNNPEAPMILDRLLRFLASYSVLQCCILEDTQRLGATQCFYSLTSGSKYFVNDVDGVSLGPFLALLTDKVFCKTWVELKGVIQEGGTPFNKAYGMHFFGYTRLDPRFNEVFNNGMLSSSTIIMKTILELYSGFEHINRLVDVGGGLGINVKLITSKYPHIEGVNFDLPHVIKYAPIYTGVEHVSGDMFESVPNGDAIFMKWILYDWNDECCIKLLENCYKAIPDDGNVIVVDTILPIVPGTTSTDKVVSTSDLFMLTLTTGGRERTQQEFMALAIRSGFCGIKVVCCVASFCVMEFFK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi702g00012 346 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 8 346 IPR016461 GO:0008168
Sebi702g00012 346 PANTHER O-METHYLTRANSFERASE 26 329 IPR016461 GO:0008168
Sebi702g00012 346 PIRSF O-mtase 8 346 IPR016461 GO:0008168
Sebi702g00012 346 Pfam Dimerisation domain 26 66 IPR012967 GO:0046983
Sebi702g00012 346 Pfam O-methyltransferase domain 123 327 IPR001077 GO:0008171
Sebi702g00012 346 SUPERFAMILY "Winged helix" DNA-binding domain 25 101 IPR036390 -
Sebi702g00012 346 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 103 344 IPR029063 -
Sebi702g00012 346 FunFam Caffeic acid O-methyltransferase 99 346 - -
Sebi702g00012 346 Gene3D Vaccinia Virus protein VP39 156 336 IPR029063 -
Sebi702g00012 346 Gene3D - 26 174 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi702g00012 Sebi-Chr702 237015 239576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi702g00012 25 346 Monolignol Biosynthesis Gene Families AT5G54160 51.543 6.34e-114 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi702g00012 K13066 - gmx:100789402 416.387