Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi702g00008 ATGTCTATGTTCGAAGAAAATGAGACATCCAAGGTATGTTTTGCTTATGTGGAATGTAACATCAATGTCATAAGTAGTCGAGGTCTATATGATGATGCTAATGGTTCTGACGAAGGTGAAGAATTCTTAAGTGAAGAAAGTTTATGTGGCCCACGAATTCTAAGATGGTATGGTAGGTCGAATGGGTTTTCTGTTCGTAAAAGCAATGTAGTAACGAACAGTAAGGGTGGCATTTTGCAGCAAACATTTGTCTGTTTTGCACAAGGACATAGAAAGGCTAGGCGCTCCACAAGAAGTTCTAAAAAGAGACAACTGGAACCTCTAATGAGGCAGTCAGGGAGCTACCAGAATATTGGATTTTTGAAGAAAGATATTGATAATGAGATAGGCAGACAAAGACAACAACAAGCTTCTGATGCTAGTGGTGCTCTGGTGTATCTTCGACAGTTGCGGTTGAAAGACAATTTGATGTTCTACAAACACATATCAGACGAGGATGGGAGACTTCAGCACCAATTCTGGTGTGATGAGGGAAGCCAAATGAATTACCAAGTTTTTGGTGATGTGTTAGCCTTTGATGCTACTTATCGCAAGAACAAGTACATGTGTCCTGTAGTGATATTCTCTGCCGTTAATAACCATAATCAGACCATTGTATTTGCAAGTGCTATTGTATCTGATGAGACAGAACAAACATATGTTTGGTTGCTGGAACAACTTGCACAAGTAATGAAAGGTAAGGAATCATCATCAGTAATAATCGACAGTGATTTGGCAATGAGGAACGCAATAAGAAAAGTATTTCCTAATGCGCACCACAGATTATGTGCTTGGAATTTGCTTCGCAATGCAACAAGCAATGTTGGAATTCATGATTTCATGGATTATTTCAAGAGGTGTATGTTGAGTGATTGCGATGTGGCTGAATTTGAGCAAAGGTGGAACAACATGCTCCATGTTCGGACTACATCTCGTTGTGAAGCTTTACATTGTCACTTAGGCAAGTTTATACACTCGAGGATTAATTTGACCGAGTTTATGGAGCAGTTTCATCGATTCCTAACCTACTTTCATTTCAGAGAAGTGGAAGCTGACTTTAGATCTGTGCATGAGCCCATTCAAATTAACTGTCCGTGCCTACGAATGGAATCCATAGGGTTTCCATGCGAGCACATCATAGTTGTATTGGTTTACTTGGACTATTGTGAACTACCAAAGTGTTTGATGTTGGATAGGTGGACAAAGAGTGCGAAGGCTTCCATTCGTGGGACTTACATTGATGGTTCATGTTACTGGAATTCTCATTTGATTGCTAGATATGCAACTTTGCTTGAACTTTGTAGAGAATTGTGCGAACTTGCATCTCATGATGAAGATGACTATAACCATATAGTTGAGTTGGTTACTAATGAACTTCATAAATTGAGGCGGAAGAATATAGTCGCAAATGTTATTGACAATAATGCATCACAAAATATGCATAGAAACTTACGGAATCCAGCACCTGTCAAAAGCAAGGGATGTGGTCCAACCACAGCTGCTACATCAACAAGATGCAGGCGAGGTCGTCATTGTGGTATTTGTGGTGCAAGTGGTCACAATAGGAGGTCGTGTCCAATTAGTAGACAAAATGTTGAAATGACCCCCTCCACTACCAGGCATCCATTTATAGGTGAAGACGAAGGTTCCTTTTATCACAATAACAACCTAAATAGTGGCTTGGTTAGTGGTTAA 1734 0.3991 MSMFEENETSKVCFAYVECNINVISSRGLYDDANGSDEGEEFLSEESLCGPRILRWYGRSNGFSVRKSNVVTNSKGGILQQTFVCFAQGHRKARRSTRSSKKRQLEPLMRQSGSYQNIGFLKKDIDNEIGRQRQQQASDASGALVYLRQLRLKDNLMFYKHISDEDGRLQHQFWCDEGSQMNYQVFGDVLAFDATYRKNKYMCPVVIFSAVNNHNQTIVFASAIVSDETEQTYVWLLEQLAQVMKGKESSSVIIDSDLAMRNAIRKVFPNAHHRLCAWNLLRNATSNVGIHDFMDYFKRCMLSDCDVAEFEQRWNNMLHVRTTSRCEALHCHLGKFIHSRINLTEFMEQFHRFLTYFHFREVEADFRSVHEPIQINCPCLRMESIGFPCEHIIVVLVYLDYCELPKCLMLDRWTKSAKASIRGTYIDGSCYWNSHLIARYATLLELCRELCELASHDEDDYNHIVELVTNELHKLRRKNIVANVIDNNASQNMHRNLRNPAPVKSKGCGPTTAATSTRCRRGRHCGICGASGHNRRSCPISRQNVEMTPSTTRHPFIGEDEGSFYHNNNLNSGLVSG 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi702g00008 577 ProSiteProfiles Zinc finger SWIM-type profile. 362 400 IPR007527 GO:0008270
Sebi702g00008 577 PANTHER OS01G0519700 PROTEIN 374 507 - -
Sebi702g00008 577 Pfam MULE transposase domain 189 283 IPR018289 -
Sebi702g00008 577 ProSiteProfiles Zinc finger CCHC-type profile. 525 539 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi702g00008 Sebi-Chr702 165953 168401 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi702g00008 MULE 2.9e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi702g00008 - - tpra:123886262 366.696