Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi701g00033 ATGATGGAGTTACCAGATATTTGGATATTGAGATTGGCTGTGGCATGTGCACTTTGTCTGTATATATTTCTCAGATCAGCTTCTGCCTCTGAAGAGTTTGAGAGCATAGCATGCTGTGCTGATTCAAATTACACAGATCCGCTGACCACCTTAAATTATACAACAGATTACAGCTGGTTCTCTGATAAAAGAAGTTGCAGACAAATACCCGAAACTGGGTTAAACAATAGAAGCAATGAAAATGTTCGACTGTTTGATATAGATGAGGGAAAGAGATGTTACAATTTGCCAACAATTAAGAATAAAGTATATCTGATAAGGGGCACATTTCCATTTGACAGCACAAATTCTTCCTTTTATGTTTCAATAGGGGTTACACAATTAGGTGCAGTGAGATCATCCAGGCTCCAGGGCTTGGAAATTGAGGGAGTTTTCAGAGCCACCAAAGACTACATAGACTTCTGCTTAGTGAAGGGGGAGGTTAATCCCTTTATTTCCCAGCTTGAATTAAGGCCATTACCAGAAGAGTATCTACATGATTTGCCTACCAGTGTTTTAAAACTGATAAGCAGAAATAATCTTGGGGGCTCGAAAGATGACATCAGGTTCCCAGTTGACCGAAGTGATAGAATCTGGAAAGCAACTTCAAGTCCATCTTCTGCTTTTCCACTGTCTTTCAATATCAGCAATGTTGACCTCCAAGCTAATGTGACACCACCTCTACAAGTCCTACAAACAGCTATTACCCACCCTGAGCGCTTGGAGTTCATCCACAATGGCCTTGAGACTGAGGATTACGGATACCGTGTGTTTCTCTACTTCCTTGAAATAAATAGAACTCTCAAAGCAGGCCAACGGGTGTTTGACATCTATGTTAACAGTGAGATTAAAAAGGAGAGATTTGATGTATTGGCTGGAGGGTCCAACTACGGATACACTGTCTTGAACGTTTCAGCAAATGGATCACTTAATGTAACCTTGGTCAAGGCATCTGATTCTGAGTTTGGACCTCTTTTGAATGCTTATGAGATCCTACAGGTCCGATCATGGGCTGAAGAGACCAACCAAACAGACGTGGAAGTGATTCAGAAGATGAGAGAAGAACTATTGCTGCAAAACCAAGACAATAAAGCACTGGAAAGTTGGACTGGAGACCCTTGTATACTTTTCCCCTGGCAAGGAATAGCATGTGATGGTTCAAATGGTTCAACAGTTATAACTAAGCTGGATCTTTCTTTGAGTAATCTCAAAGGACCAATTCCTTCCAGTGTCACTGAGATGACCAACTTAAAAATACTGAACCTGAGCCACAACAGTTTCGATGGTTATATCCCCTCATTTCCGCTGTCATCCTTGTTGATATCAATAGATCTGAGCTATAATGATCTTGCGGGAACACTTCCAGAATCGATTACTTCACTGCTACATTTAAAATCATTATATTTTGGCTGCAACCAACACATGAGCGAAAAGGATCCAACAAATTTAAACAGTTCACTAATCAATACAGATTATGGAAGATGCAAATCAAAAGAACACAAATTTGGACAAGGAATCGTTATTGGAGCTATTACATGCGGATCACTTTTGGTTACTTTGGCTGTTGGAATTCTTTTTGTTTGCCGCTACAGACAAAAACTACTTCCATGGGAAGGTTTTGGTGGAAAGAACTACCCAATGGCAACAAATGTAATTTTCTCTTTGCCAAGCAAAGATGATTTCTTCATAAAGTCTGTATCAATTCAGTCATTCACTTTGGAGTATATAGAAGTAGCCACAGAGAGGTACAAAACTTTGATAGGTGAAGGAGGGTTTGGCTCTGTTTATCGGGGCACTCTAAATGATGGTCAAGAGGTGGCAGTAAAAGTCCGGTCAGCCACATCAACTCAAGGAACTCGAGAATTTGATAATGAGCTAAACCTACTTTCTGCAATACAGCATGAGAACCTGGTTCCTCTTCTTGGTTACTGTAATGAAAATGATCAACAAATTCTTGTGTATCCTTTCATGTCCAATGGTTCTTTGCAAGATAGATTATATGGGGAACCAGCAAAGAGAAAAGTATTAGACTGGCCAACTAGACTATCTATTGCTCTTGGTGCAGCTCGAGGTTTGGCATATCTTCACACATTTCCAGGACGTCCTGTAATACACAGGGATGTGAAATCAAGCAATATACTTCTGGATCATAGCATGTGTGCCAAGGTTGCAGATTTTGGTTTCTCAAAATATGCTCCACAGGAAGGAGACAGTAATGTTTCCCTTGAAGTAAGAGGAACCGCAGGATACCTGGATCCTGAGTACTACAAAACCCAGCAATTATCTGAAAAGAGTGATGTATTCAGCTTTGGCGTGGTTCTGCTTGAAATTGTGAGTGGACGGGAACCTCTCAACATACAGAGACCACGGAATGAGTGGAGCTTGGTTGAATGGGCTAAACCATATATAAGAGCCTCAAAGGTGGAAGAAATTGTGGATCCTGGCATCAAGGGAGGATACCATGCAGAAGCAATGTGGAGAGTAGTGGAAGTAGCACTGCAATGTCTTGAACCCTTCTCAGCATATAGACCATGCATGGTTGACATTGTCCGTGAGTTGGAGGATGCTCTCATTATAGAAAACAATGCATCTGAATACATGAAGTCCATAGATAGCCTTGGAGGATCCAACCGCTACTCCATTGTCATAGAGAAAAGGGTGCTGCCCTCAACTACATCTACAGCAGAATCAACCATCACAACCCAATCCTTGTCCCACCCACAGCCGAGATAG 2772 0.4134 MMELPDIWILRLAVACALCLYIFLRSASASEEFESIACCADSNYTDPLTTLNYTTDYSWFSDKRSCRQIPETGLNNRSNENVRLFDIDEGKRCYNLPTIKNKVYLIRGTFPFDSTNSSFYVSIGVTQLGAVRSSRLQGLEIEGVFRATKDYIDFCLVKGEVNPFISQLELRPLPEEYLHDLPTSVLKLISRNNLGGSKDDIRFPVDRSDRIWKATSSPSSAFPLSFNISNVDLQANVTPPLQVLQTAITHPERLEFIHNGLETEDYGYRVFLYFLEINRTLKAGQRVFDIYVNSEIKKERFDVLAGGSNYGYTVLNVSANGSLNVTLVKASDSEFGPLLNAYEILQVRSWAEETNQTDVEVIQKMREELLLQNQDNKALESWTGDPCILFPWQGIACDGSNGSTVITKLDLSLSNLKGPIPSSVTEMTNLKILNLSHNSFDGYIPSFPLSSLLISIDLSYNDLAGTLPESITSLLHLKSLYFGCNQHMSEKDPTNLNSSLINTDYGRCKSKEHKFGQGIVIGAITCGSLLVTLAVGILFVCRYRQKLLPWEGFGGKNYPMATNVIFSLPSKDDFFIKSVSIQSFTLEYIEVATERYKTLIGEGGFGSVYRGTLNDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNENDQQILVYPFMSNGSLQDRLYGEPAKRKVLDWPTRLSIALGAARGLAYLHTFPGRPVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIQRPRNEWSLVEWAKPYIRASKVEEIVDPGIKGGYHAEAMWRVVEVALQCLEPFSAYRPCMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTTSTAESTITTQSLSHPQPR 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi701g00033 923 SUPERFAMILY Protein kinase-like (PK-like) 574 866 IPR011009 -
Sebi701g00033 923 ProSitePatterns Protein kinases ATP-binding region signature. 600 622 IPR017441 GO:0005524
Sebi701g00033 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 716 728 IPR008271 GO:0004672|GO:0006468
Sebi701g00033 923 PANTHER OS07G0107800 PROTEIN-RELATED 35 870 - -
Sebi701g00033 923 Gene3D Phosphorylase Kinase; domain 1 566 669 - -
Sebi701g00033 923 SMART serkin_6 594 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi701g00033 923 Pfam Protein tyrosine and serine/threonine kinase 598 866 IPR001245 GO:0004672|GO:0006468
Sebi701g00033 923 Gene3D Transferase(Phosphotransferase) domain 1 670 883 - -
Sebi701g00033 923 SUPERFAMILY L domain-like 376 496 - -
Sebi701g00033 923 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 670 886 - -
Sebi701g00033 923 Pfam Malectin-like domain 40 347 IPR024788 -
Sebi701g00033 923 ProSiteProfiles Protein kinase domain profile. 594 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi701g00033 923 Gene3D - 187 348 - -
Sebi701g00033 923 FunFam Nodulation receptor kinase 562 669 - -
Sebi701g00033 923 CDD STKc_IRAK 600 867 - -
Sebi701g00033 923 Gene3D Ribonuclease Inhibitor 356 512 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi701g00033 Sebi-Chr701 367509 375158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi701g00033 10 873 Receptor kinase-like Gene Family AT1G67720 35.210 2.37e-138 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi701g00033 Malectin_like 9e-49 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi701g00033 - - gmx:100781986 1572.37