Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi701g00017 ATGGCTTTACAACCAGAGGTGGAGCATCCCAGGAAGGCTATTGGATGGGCAGCTAGGGATTCATCTGGGGTCCTCTCCCCTTTCAACTTCTCCAGAAGGGAAACGGGTGAGAAAGATGTGACATTCAAAGTGCTATATTGTGGGATATGTCACTCGGACCTCCACATGCTGAAGAACGAGTGGGGCAGTTCCATCTACCCACTAGTACCTGGGTGGTTAACAAGTCTCCAAGTGATATTGACAGAGGTGGGGAGCAAGGTGGAAAAGTTCAAAGTTGGAGACAGGGTAGGTGTGGGATGCTTGGTTGGATCCTGTAGCACATGCCAAAGCTGTGCTGATGATCTTGAGAATTACTGCCCAAAAATGATCCTCACATACGGTGCCAAGTATGTTGATGGCACCATCACATACGGAGGCTACTCTGACACAATGGTTGCTGATGAACACTTTGTGATTGGCATTCCTGATGGCCTACCACTTGATGCTGCTGCACCTCTCCTTTGTGCTGGGATCACAGTGTATAGCCCTTTGAGATATTTTGGACTTGACAAGCCTGGTCTCCATGTGGGTGTGGTTGGTCTCTGTGGATTAGGCCATATGGCTGTCAAGTTTGCCAAAGCACTTGGAGCTAAGGTTACAGTGATTAGTACATCTCCTAACAAAAAGAAGGAAGCCATTGAACAGTTAGGAGCTGACTCATTTGTGGTCAGCCGTGAGCAAGATCAGATGCAGGCTGTAATGGGCACCTTGGATGGTATCATTGACACTGTTTCTGCAATCCATGCTCTCTTGCCTTTGATTAGTCTGTTGAAGTCTCATGGTAAACTAATCCTGGTCGGTGCCCCAGAAAAGCCTCTGGAGCTGCCAATATTTCCTTTAATAAAGGGGAGAGTAATAATTGCTGGCAGTTGCATTGGAGGGTTGAAGGAGACACAAGAAATGATTGATTTTGCTGCCAAACATGGCGTGAAACCTGAGATTGAGGTTATCCCAATAGATTATGTGAACACTGCAATTGAGCGTCTCATCAAAGGAGATGTGAAATATCGATTTGTTATTGACATTGGAAACACACTGAAGGCAAGTTCATGA 1092 0.4625 MALQPEVEHPRKAIGWAARDSSGVLSPFNFSRRETGEKDVTFKVLYCGICHSDLHMLKNEWGSSIYPLVPGWLTSLQVILTEVGSKVEKFKVGDRVGVGCLVGSCSTCQSCADDLENYCPKMILTYGAKYVDGTITYGGYSDTMVADEHFVIGIPDGLPLDAAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLCGLGHMAVKFAKALGAKVTVISTSPNKKKEAIEQLGADSFVVSREQDQMQAVMGTLDGIIDTVSAIHALLPLISLLKSHGKLILVGAPEKPLELPIFPLIKGRVIIAGSCIGGLKETQEMIDFAAKHGVKPEIEVIPIDYVNTAIERLIKGDVKYRFVIDIGNTLKASS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi701g00017 363 CDD CAD1 15 354 IPR047109 GO:0016616
Sebi701g00017 363 PANTHER ALDEHYDE REDUCTASE 5 358 IPR047109 GO:0016616
Sebi701g00017 363 FunFam Cinnamyl alcohol dehydrogenase 169 325 - -
Sebi701g00017 363 FunFam Uncharacterized protein 16 168 - -
Sebi701g00017 363 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Sebi701g00017 363 Pfam Alcohol dehydrogenase GroES-like domain 38 152 IPR013154 -
Sebi701g00017 363 FunFam Putative cinnamyl alcohol dehydrogenase 6 326 355 - -
Sebi701g00017 363 Gene3D - 169 325 - -
Sebi701g00017 363 Gene3D - 16 355 - -
Sebi701g00017 363 SMART PKS_ER_names_mod 23 353 IPR020843 GO:0016491
Sebi701g00017 363 SUPERFAMILY GroES-like 20 186 IPR011032 -
Sebi701g00017 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 324 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi701g00017 Sebi-Chr701 203166 205395 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi701g00017 11 362 Monolignol Biosynthesis Gene Families AT4G37990 69.034 6.53e-168 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi701g00017 K23232 - qsa:O6P43_025192 592.808