Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi700g00007 ATGCTGCGACGCTATGAAGTTCAAGGATTCAAGCACAAACGGATGCTGAGGCGGCTATGGAAGTTCAAGGATTCATTGACGAATGTGGTAGCCCTTAGTAGGTTTGGGGATTTGCGCCTTGAGAGCATGGGCCTAACCGGCATCATCGATTTGGGATCTCTGGGTTCAATGCCTGCATTACGGTCACTTAGCCTAATGAACAACACCTTTGTGGGTGAGATACCTGACGATGCATTTGTTGGTTTGGATAAGTTGAGGAAAATTTATTTGGCAAATAACGAGTTCACTGGGAAAATTCCTTCCTCCCTCGCTACCTTGCCTAGCCTCCTTATCCTCAAGCTCGACTCAAACAAGTTTCATGGTCAAATCCCTAATTTTCCACACAAATATTTGAAGATTATCAACCTTTCTAACAACGAGTTAAAGGGTCCCATCCCGGCCAATCTAAGTACCTTCGACCCCTCCTCCTTTAGTGGAAACATAGGTCTATGCGGGCCGCCCCTGAAGAATGAGTGCCAAGCTGAAGCCCCAATCCCAGGGGCAAGTGTGTCTGGCAAAATGCGCATTATGAAAATTTTACTTATTGTGATTTTGATAGCATTAATAATAGCTATCCTAGTTGCAGTATTGGCCACATGGCGCTTGAGGTCCCAAAATGAGCCTGAGCATCAAGTCTCAGCCTTAAAGTTACAGGCGCAGGCCTCTAACAAAAATGTTCATCCCGTTTATGTGAAAACCAAAAGCCTAGCGGAACACTATGAATCTAATTCTAAGCAAGGATCAGAATATGGTTATGGACATTCCAAGAAAGGGGAACAAGGGAAGTTGACATTCCTCAAGAATGACAATCTAAAGTTTGATTTACAAGATTTGCTAAAGGCCTCTGCTGAAATTCTTGGTAGTGCCTCATTTGGGTCTTCCTACAAGGCAGTGATTTCAGATGGCCAAGCTGTGGTTGTTAAGAGAAAAGAAGAGAAGCTCCTGCTCTCTGCCTTTGTTTACAACGGTTGCTTGGCTAGCCATCTTCATGGTAATCATAACTATCAAAAGCCAGGGCTTGATTGGCCAACCCGATTGAAAATCGTTAAAGGAGTAGCTAAGGGTTTGGCTTACCTATATAGTACACTCCCAAGCCTGATCGTGCCTCATGGACACCTCAAATCTTCCAATGTGCTTTTGGATGAATCTTTTGAGCCTTTACTCACAGATTATGCCCTCAGTCCTTTAATCAATCTTGACCATGCCCAACAAGTCATCATGCCTTACAAATCCCCTGAGTATGCTCAACTTGGCCGCATTACAAAGAAAACTGATGTATGGAGTTTTGGAATTCTGATATTGGAGATCTTAACGGGCAAATTCCCAGAGAACTATATCTCACACAGGCATAAGAGTGATTCTGACATAGCTAGTTGGGTGAATGTGATGATTACTGAGAAGCGTACCGGTGAGGTGTTTGACGTAGAGATGGGAGGAGTTGGAAATAGTAAAGCTGAATTGATCAAACTTTTAAAGATTGGCTTAAGTTGTTGTGAGGAGAATGTGGAAAGAAGGTTGGATATCAAGGAAGCTCTTGAGCAAATTGAAGACTTGAAAGAAGGGGAAAGTGATGGGGAATACTCTTCATCTCTCATCTCCAATGAAAGGGATGCTTATAGAGCTGTGTGA 1668 0.4329 MLRRYEVQGFKHKRMLRRLWKFKDSLTNVVALSRFGDLRLESMGLTGIIDLGSLGSMPALRSLSLMNNTFVGEIPDDAFVGLDKLRKIYLANNEFTGKIPSSLATLPSLLILKLDSNKFHGQIPNFPHKYLKIINLSNNELKGPIPANLSTFDPSSFSGNIGLCGPPLKNECQAEAPIPGASVSGKMRIMKILLIVILIALIIAILVAVLATWRLRSQNEPEHQVSALKLQAQASNKNVHPVYVKTKSLAEHYESNSKQGSEYGYGHSKKGEQGKLTFLKNDNLKFDLQDLLKASAEILGSASFGSSYKAVISDGQAVVVKRKEEKLLLSAFVYNGCLASHLHGNHNYQKPGLDWPTRLKIVKGVAKGLAYLYSTLPSLIVPHGHLKSSNVLLDESFEPLLTDYALSPLINLDHAQQVIMPYKSPEYAQLGRITKKTDVWSFGILILEILTGKFPENYISHRHKSDSDIASWVNVMITEKRTGEVFDVEMGGVGNSKAELIKLLKIGLSCCEENVERRLDIKEALEQIEDLKEGESDGEYSSSLISNERDAYRAV 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi700g00007 555 Gene3D Transferase(Phosphotransferase) domain 1 335 541 - -
Sebi700g00007 555 ProSiteProfiles Protein kinase domain profile. 243 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi700g00007 555 SUPERFAMILY L domain-like 32 151 - -
Sebi700g00007 555 Pfam Leucine rich repeat 58 119 IPR001611 GO:0005515
Sebi700g00007 555 Gene3D Phosphorylase Kinase; domain 1 260 334 - -
Sebi700g00007 555 Gene3D Ribonuclease Inhibitor 129 175 IPR032675 -
Sebi700g00007 555 Gene3D Ribonuclease Inhibitor 21 128 IPR032675 -
Sebi700g00007 555 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 322 533 IPR046959 -
Sebi700g00007 555 Pfam Protein tyrosine and serine/threonine kinase 318 461 IPR001245 GO:0004672|GO:0006468
Sebi700g00007 555 SUPERFAMILY Protein kinase-like (PK-like) 297 527 IPR011009 -
Sebi700g00007 555 FunFam Pollen receptor-like kinase 1 333 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi700g00007 Sebi-Chr700 309656 312169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi700g00007 38 551 Receptor kinase-like Gene Family AT5G35390 44.786 1.27e-147 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi700g00007 PK_Tyr_Ser-Thr 8.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi700g00007 - - aprc:113854862 758.829