Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi700g00002 ATGAGGGAGCCACTTTCATCACTCTCTGAATGGGAACTACAGGAAGGTCGTATTGCCGTTTCAACTTTTCTTCAACAATTTGGAGTCTCGGAGGAGGAATCGCTATCCATCGCATCGAAATCACCTTCTTATCTGAACATGTTAGTGGAAGGTGTCAAGGATTTGGAGCAGCTTTCGATGTGGGATTCCAATTCCAATTCTGGTGACTTCAACTTCCGTGACAAGCTTCTTCACATTGCTGCTCAAAAAGGTGACAATGGCAAACTCGCTTATTTAGAGAGTCTCGGTTTTACTCTCTATTCCTCTATGAATATCGCAAGGTATCTATCCACTGACACACTACCATCTCTCATACACAAGGTTACATCTATCAAGCAACTCTTGTTTCCTCCAACTCCTTCTGATTCTCATGAATTGCTTATCAAAAGTATTCGCCGCATGATGCGCTACTTATCGATTTCAATTGATGAAGATCTACAACACACTCTTTCGTTTTTCGAAAAGGTTGAAGCAAGACGCGGAGGTCTGAACATTTTGGTTTCCAACGATGATGCAGCTTTCTGTTACTTGATTGAATCGTTTCCTCGTCTGCTTTTGTTATCTGTAGACAATCACGTGACGCGTGTTGTGAATTTTTTTGAGAATATTGGAATCCCTAGAAATCGCATCCCAAATATAATATTGGGTTTTCCTCCTATTCTTTTGTGGAATCTTCAAGTTCTTAAAACTAGAGTACTGGCATTGAAGGAGATTGACATAGTGGATAAAGATTATGCCAGGTTGATGCTAACATATCCTTGGGTTCTATCTACAAGCATTCAAGAGAACTATGAGGAGGTCCTTGAGTTTTTATATACTGAGAAGGTTCCAATGACATGGATAGACCATGCAATCAAAAGCCAACCTCATCTACTGGGTTGTTCACCTAGCACACTGAAGTTGATGCTGGATCAGTTTGCTGAACTAGGAGTTCAAGGCAAAAAGTTGGATCAGGTTATTGCTAAAAGTCCTCAGCTACTATTACGGAAGCCCAGAGACTTTCTACAGGTTGTTCTGTTCTTCGAAAATATGGATTTTGATAAAGAAACTATTGGGAGAATACTTGCCCGTTGTCCTGAAATTTTTGCTGCCAGCATTAGTAAAACTCTACAGAGGAAGATTGAGTTCCTTAGTGGGGTTGGCGTCTCTAAAACCTACCTTCCGGTGGTTATCAGAAAGTATCCAGAATTACTTGTGTCTGACATTGACAAAACTTTACTACAACGGATAATGTACTTGATGAACTTAGGAATTTCAGAGAAGGAGATAGCATTTATGGTACGTACATTTTCTCCTCTTCTTGGGTACAGCATAGAGGAGGTTTTGAGACCAAAAATAGAATTCCTGGTGAACTCAATGGAGAGGCCAGTAAGAGATGTGGTGGACTACCCTAGGTATTTTAGCTATTCGCTTGAAAAGAAGATTAAACCAAGATATTGGGTTCTGAAAGGAAGGAATATTGAATGTAGCTTAAAGGATATGCTGGGAAAAAATGATGAAGAATTTGCTGCTGAATATATGGGTGTGGGAAGGATGCACGACTGTCCTCTGCCTTCTCATGATAGGCTGTAA 1611 0.4035 MREPLSSLSEWELQEGRIAVSTFLQQFGVSEEESLSIASKSPSYLNMLVEGVKDLEQLSMWDSNSNSGDFNFRDKLLHIAAQKGDNGKLAYLESLGFTLYSSMNIARYLSTDTLPSLIHKVTSIKQLLFPPTPSDSHELLIKSIRRMMRYLSISIDEDLQHTLSFFEKVEARRGGLNILVSNDDAAFCYLIESFPRLLLLSVDNHVTRVVNFFENIGIPRNRIPNIILGFPPILLWNLQVLKTRVLALKEIDIVDKDYARLMLTYPWVLSTSIQENYEEVLEFLYTEKVPMTWIDHAIKSQPHLLGCSPSTLKLMLDQFAELGVQGKKLDQVIAKSPQLLLRKPRDFLQVVLFFENMDFDKETIGRILARCPEIFAASISKTLQRKIEFLSGVGVSKTYLPVVIRKYPELLVSDIDKTLLQRIMYLMNLGISEKEIAFMVRTFSPLLGYSIEEVLRPKIEFLVNSMERPVRDVVDYPRYFSYSLEKKIKPRYWVLKGRNIECSLKDMLGKNDEEFAAEYMGVGRMHDCPLPSHDRL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi700g00002 536 PANTHER CGI-12 PROTEIN-RELATED 422 520 IPR003690 GO:0003690|GO:0006355
Sebi700g00002 536 FunFam Mitochondrial transcription termination factor family protein 310 523 - -
Sebi700g00002 536 SMART mt_12 224 254 IPR003690 GO:0003690|GO:0006355
Sebi700g00002 536 SMART mt_12 295 325 IPR003690 GO:0003690|GO:0006355
Sebi700g00002 536 SMART mt_12 141 172 IPR003690 GO:0003690|GO:0006355
Sebi700g00002 536 SMART mt_12 259 290 IPR003690 GO:0003690|GO:0006355
Sebi700g00002 536 SMART mt_12 401 432 IPR003690 GO:0003690|GO:0006355
Sebi700g00002 536 SMART mt_12 365 396 IPR003690 GO:0003690|GO:0006355
Sebi700g00002 536 SMART mt_12 470 501 IPR003690 GO:0003690|GO:0006355
Sebi700g00002 536 SMART mt_12 330 360 IPR003690 GO:0003690|GO:0006355
Sebi700g00002 536 SMART mt_12 188 219 IPR003690 GO:0003690|GO:0006355
Sebi700g00002 536 SMART mt_12 437 469 IPR003690 GO:0003690|GO:0006355
Sebi700g00002 536 Gene3D Transcription termination factor 3, mitochondrial 314 524 IPR038538 -
Sebi700g00002 536 Pfam mTERF 210 516 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi700g00002 Sebi-Chr700 195122 200389 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi700g00002 mTERF 4.5e-92 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi700g00002 K15031 - gmx:100802127 738.028