Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi69g00048 ATGGTGAGGGTTAGTGTGTTGAATGATGCTCTGAAGAGCATGTACAATGCTGAGAAAAGGGGAAAGCGCCAAGTCATGATCAGGCCATCTTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCATGGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGAAAAATTGTGGTTGAATTGAATGGTAGGCTGAATAAGTGTGGGGTTATTAGTCCCCGTTTTGATGTGGGTGTCAAAGAGATTGAAGGTTGGACCGCTAGGCTTCTCCCCTCAAGACAGGCTCCAATTTTTGTTAAGGAGCTCCTTGCTAAAGCAGCAGTTGTGGGGTCAGTTTTAAATGGTCTTGATAAGGGTGGTCAAGTTGTCAATGATGATTCTTCAACTTACTGCATCTGTGGAGCTGAATCAACCCCTTCATAA 435 0.4368 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQAPIFVKELLAKAAVVGSVLNGLDKGGQVVNDDSSTYCICGAESTPS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi69g00048 144 Pfam Ribosomal protein S8 7 88 IPR000630 GO:0003735|GO:0005840|GO:0006412
Sebi69g00048 144 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 101 IPR000630 GO:0003735|GO:0005840|GO:0006412
Sebi69g00048 144 FunFam 40S ribosomal protein S15a 1 69 - -
Sebi69g00048 144 Gene3D - 70 104 - -
Sebi69g00048 144 SUPERFAMILY Ribosomal protein S8 4 102 IPR035987 GO:0003735|GO:0005840|GO:0006412
Sebi69g00048 144 Gene3D - 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi69g00048 Sebi-Chr69 2038130 2039197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi69g00048 1 98 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.939 3.44e-68 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi69g00048 K02957 - cit:102625104 197.208