Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi69g00045 ATGCCTGATTGGTTTGATTCATTGTCTAATCTAAATGTCTTGAGTTTGAAAAGCAACCACTTAATGGGTTCATTCCCCTCTTCACTATGCAAAATTAAGAGCCTTACTGATATTTCTTTATCTCACAATGAGCTGTCTGGTGGATTGCCTGATCTTACTGCTCTCTCTGGCCTACATCTACTTGATTTAAGAGAAAATCATTTAGATTCTGAACTACCATTGATGCCCAAAACAGTAGTAACAATTCTGCTAAGTGAAAATTCATTCTCAGGTGAGATACCTAGTCAGTTTGGTGAATTGGGTCAGCTTCAACATCTAGATCTTTCATCAAACCATCTCAGTAGGATGCCCCCATCTGCTTTGTTCTCTTTGCCAAACATTAGTTATTTGAATTTAGCAAGCAATTTACTAAGTGGGTCCCTTCCATACAAATTAAAATGTGGCAGCAAACTTGGGTTTGTGGATATCTCTAGTAACAAGTTAAATGGTGTGCTTCCTTCTTGCTTGAGCAGTACATCTGATAGAAGAGTTGTAAGATATGGTGGAAACTGTTTATCTGCTGACTCTCAAGCTCAGAAGCAGGGGTCTTATTGTAAAGAATCCAGTTCTGAGAGGATGAAATTCTGGAGATGGAAAATAGCTGCAGCACTTGCCACCATTATTGTAGTTGTTCTTGTACTCTTAGCTTTTGGAGTTTTCTTTTATAGAAAATATCATTCAAGGGAGACATATAGGCATGAGATGTTGCCAAAGATTGTTCAAGATAACTCAACAACAGGGGTTTCCTCTGAAATCCTTGCTAGTGCCAGATTCATTTCTCAAACAGTGAAGCTAGGGACTCAAGCTACTCCAACTTGTCGACAGTTTCCAATTGAAGAGTTGAAGGAAATCACAAGAAACTTTGATTTGTCAACTTATATTGGTGAAGGATCCATTGGAAAGCTGTACAAAGGAAAACTAGAGAATGGATCTTACATTGTGATACGATCTCTGGCTCTGAAAAAGAAATTCTCACTACAAAATCTTAAAGCTCGGTTGGATTTACTCTCAAAGCTTCACCATCCAAATTTGGTTAGCCTCTTGGGTCATTGTATTGATGGTGGTGGAAAAGATGATATTAAATTTTCATCAGACAGGACTCTAAAATGGTCTGATAGATTGGCAATTTTAATTGGATTTGCCAAGGCAGTGCACTTTTTACATACTGGAGTAATACCAGGTTGTTTTAGAAACCAATTAAAGACAAACAATGTTTTACTTGACGAACATCATATTCCCAAGCTAAGTGACTATGGTATGTCCATGATTGCTGAAGAGATTGAAAACCCTGAGGCAAAGGGAGAGAATCCAAAATCATGCCAAAGGGAAGAATTAGAGGATGATGTCTATAATTTCGGATTTATATTGTTTGAATCACTTGCTGGACCCATAGCAAGCGAGAAAGGAGAAGCTTTTTTTCTTGATGAAAAGGCATCCTTTGGCAGTCAAGATGGTAGGAAAAAAATTGTAGATCCAGTAGTGTTGACCACTTGTTGTCAAGAGTCATTATCAATTGCAATATCTATCACAACCAAATGCATAGCTCCAGAATCCTCATCTCGTCCCTCTTTTGAGGATGTGCTATGGAATTTACAATATGCAGCTCAAGTCCAAGCCACAGCAGATGCAGATTCTACATGCTAG 1683 0.3821 MPDWFDSLSNLNVLSLKSNHLMGSFPSSLCKIKSLTDISLSHNELSGGLPDLTALSGLHLLDLRENHLDSELPLMPKTVVTILLSENSFSGEIPSQFGELGQLQHLDLSSNHLSRMPPSALFSLPNISYLNLASNLLSGSLPYKLKCGSKLGFVDISSNKLNGVLPSCLSSTSDRRVVRYGGNCLSADSQAQKQGSYCKESSSERMKFWRWKIAAALATIIVVVLVLLAFGVFFYRKYHSRETYRHEMLPKIVQDNSTTGVSSEILASARFISQTVKLGTQATPTCRQFPIEELKEITRNFDLSTYIGEGSIGKLYKGKLENGSYIVIRSLALKKKFSLQNLKARLDLLSKLHHPNLVSLLGHCIDGGGKDDIKFSSDRTLKWSDRLAILIGFAKAVHFLHTGVIPGCFRNQLKTNNVLLDEHHIPKLSDYGMSMIAEEIENPEAKGENPKSCQREELEDDVYNFGFILFESLAGPIASEKGEAFFLDEKASFGSQDGRKKIVDPVVLTTCCQESLSIAISITTKCIAPESSSRPSFEDVLWNLQYAAQVQATADADSTC 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi69g00045 560 ProSiteProfiles Leucine-rich repeat profile. 102 123 IPR001611 GO:0005515
Sebi69g00045 560 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 372 560 - -
Sebi69g00045 560 Pfam Protein tyrosine and serine/threonine kinase 303 541 IPR001245 GO:0004672|GO:0006468
Sebi69g00045 560 Gene3D Transferase(Phosphotransferase) domain 1 371 559 - -
Sebi69g00045 560 Pfam Leucine rich repeat 2 45 IPR001611 GO:0005515
Sebi69g00045 560 Pfam Leucine rich repeat 80 137 IPR001611 GO:0005515
Sebi69g00045 560 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 79 203 - -
Sebi69g00045 560 PANTHER RECEPTOR-LIKE PROTEIN 55 2 121 - -
Sebi69g00045 560 SUPERFAMILY Protein kinase-like (PK-like) 282 544 IPR011009 -
Sebi69g00045 560 ProSiteProfiles Protein kinase domain profile. 301 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi69g00045 560 SMART LRR_typ_2 100 123 IPR003591 -
Sebi69g00045 560 SMART LRR_typ_2 8 32 IPR003591 -
Sebi69g00045 560 SUPERFAMILY L domain-like 2 186 - -
Sebi69g00045 560 Gene3D Phosphorylase Kinase; domain 1 263 370 - -
Sebi69g00045 560 Gene3D Ribonuclease Inhibitor 1 213 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi69g00045 Sebi-Chr69 1894231 1897950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi69g00045 1 492 Miscellaneous Gene Families AT5G14210 55.258 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Sebi69g00045 PK_Tyr_Ser-Thr 2.7e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi69g00045 - - gmx:100813412 909.057