Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi69g00043 ATGGCTGCTTCTGATCAGACGCTTGTTTGTGTGAAACAAGTGAAGCAAGAGGTGGTTGATGAGTGGGATGAGAGCATGCCATTACCAGGAGACATCATTGAAGGATTCTCAGAATACGATGCTGATGATGATTCCTTTTTGCTGGTCAAAACCAGTTCAGAACTTAGTACTCAGCTTGGCAAGATTAACTCAAGGGTGGAGTTCATATGGATAAAGGTTAAAAGGGGTGATAGCATTCTGAAACTCCAGACACGTATTGCACAACAAAAGGGCAAAGGCTCCATACTTCACAGAAAGTATACAATCCAAGCGGCAACAGATCACAGGCATGTTGCAGATTTAGGGGACCTGACATTAAAGCAGTGCACTGAACTGCAGGGAGTCTTTAACTGCCAAGGAGCAGGAAGCTGGCCATTGAAATCATTGGAAACCCCACCTACACACTTAACCATTTCAGGGAAAGTGAGACCTCATGATGTTGAATTTCTTGAAGAGGTTGCAGGTGAAAATTGGAATGGAGATTGCATAGTATATGCCTTCAATGCAGGCTTGCTTTCCAAGCTGCCGAGCAGAGGAAAACTAGAAGTGTCCTTGGAGACTCTCCAATGTGAAATATATACAGTATCACCAATCAGGAAGCTTATTCACAATGCAAGTGAACGTGATCGCAGAAAGAAGATCAATGCTCTGTATTCCTCACTTCGTTCACTTCTTCCTGTTGCAGATCAAATGGTACTTAACACCCTCTCCACTCCCTCTTTGTTTGGCATGGATATATTGGTTAAATTTCTAAATGCAACAACTTCAAGAAATTAG 816 0.4265 MAASDQTLVCVKQVKQEVVDEWDESMPLPGDIIEGFSEYDADDDSFLLVKTSSELSTQLGKINSRVEFIWIKVKRGDSILKLQTRIAQQKGKGSILHRKYTIQAATDHRHVADLGDLTLKQCTELQGVFNCQGAGSWPLKSLETPPTHLTISGKVRPHDVEFLEEVAGENWNGDCIVYAFNAGLLSKLPSRGKLEVSLETLQCEIYTVSPIRKLIHNASERDRRKKINALYSSLRSLLPVADQMVLNTLSTPSLFGMDILVKFLNATTSRN 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi69g00043 271 Gene3D - 209 257 IPR036638 GO:0046983
Sebi69g00043 271 Pfam Raffinose synthase or seed imbibition protein Sip1 119 217 IPR008811 -
Sebi69g00043 271 PANTHER - 105 217 IPR008811 -
Sebi69g00043 271 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 208 248 IPR036638 GO:0046983
Sebi69g00043 271 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 211 271 IPR011598 GO:0046983
Sebi69g00043 271 Pfam Helix-loop-helix DNA-binding domain 212 239 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi69g00043 Sebi-Chr69 1715372 1716470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi69g00043 118 214 Glycoside Hydrolase AT1G55740 41.584 3.04e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi69g00043 Raffinose_syn 6.3e-13 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi69g00043 - - psat:127078975 184.111