Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi69g00022 ATGCAGGGCCTCTCTTCCTTTTTCACTGTGTCGCTATTCTCATTCTCTCTACGCATCTGTTTAGAGAACCTTTCACCCAGCAACCCCAGCACAGCCACCACGCTCCCATTCTCTACAGTTTCAGATCCCCCATCGTCTCTTCAGTCCCACCTGCAACTACCAAACGCGTACGACCGCACCGATCGGACACCTGCAGTAAACGCTCCAGATGAGCAATGCGCGTATCAAACCATTGTCCACATTGGTGGCCATGTTTTCAAAGGAAATCTGTATGATCAAGGTCCAGAAAGTTCTTATACCAATACAGCTGTTGAGGGTTCCTCCAGCAGAGGTGGAGGTGAAGCTCATCAGCAACTTGGTTTCATAACCGCTGCAACTGCAACCACAGCCACAGGTAGTGGCAATCCATTTGACCCTTCACTTTACCCCTCTTCTCTGAATGCTTTTATGGCTGCAACTAGTAAAGATGAATACCTGACATTATCAGAAAATTCTGGAGAATAG 504 0.4782 MQGLSSFFTVSLFSFSLRICLENLSPSNPSTATTLPFSTVSDPPSSLQSHLQLPNAYDRTDRTPAVNAPDEQCAYQTIVHIGGHVFKGNLYDQGPESSYTNTAVEGSSSRGGGEAHQQLGFITAATATTATGSGNPFDPSLYPSSLNAFMAATSKDEYLTLSENSGE 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi69g00022 167 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 61 147 IPR007818 GO:0003700|GO:0006355
Sebi69g00022 167 MobiDBLite consensus disorder prediction 96 114 - -
Sebi69g00022 167 Pfam Domain of unknown function (DUF702) 45 96 - -
Sebi69g00022 167 NCBIfam LRP1 C-terminal domain 62 95 IPR006511 -
Sebi69g00022 167 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi69g00022 Sebi-Chr69 826814 827801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi69g00022 59 151 C2H2 Transcription Factor Family AT1G19790 40.952 2.24e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Sebi69g00022 DUF702 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi69g00022 - - gmx:100818588 124.405