Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi69g00004 ATGGAGGACAAGGCCAGAATCTGCACGGTGGATCCAAAGAGCGGTTTCAACTCCGCTTCCAAAATCTTCCACAGCCTAAGGCGCCCACTAAACCTTCCTCCATCTAACGCCACCATCTCCGCCGCGGCCTACACCCTCTCCCTCCGCCACAACTCGCCCTGGTCAGACTCAGTTATTGCCCTCATCGACTCAGCCACGTGTCACCAGCTCTCCTACTCCGACTTCATCCACTGTTCACAAACCTTAGCCACCAACCTCACCACTCTCCACGGACTCACCAAAGGCCACACCGCATTCATTCTCTCTCCAAACCTCATCCAAGTTCCGATCCTCTACCTCGCGCTACTCTCCATTGGCGTGGTCCTCTCCCCCGCAAACCCAACCTCCACGCGCTCCGAGATTTCGAACCTCCTCAAACTCTCCCAACCTGTTATCGCTTTTACGACGTCGTTTTCCGCGAACAAACTCCAAAGCCTCCCTCTTGGAACGATTCTCCTCGACTCACCCGAGTTCGACTCGCTCTTGAAGACCGCGAGTTCCATACCGCCGCCGAACGCGGAGGTGAGTCAATCCGACGTGGCGGCGGTTTTGTACTCGTCGGGGACCACGGGGAAGTCGAAAGGAGTGATGCTCACGCACCGTAACTTGACGGCGATGGTGGCGATAAGCGACACCGTTCGCGTGCAGACGGAGGGACCTGCGGTGTACCTGCATACGGCGCCGTATTTTCACGTTTATGGTTTTACGAGTATTTTGAGGTCGGTGGCTATGATGGACACCGTGGTGGTGATGGAGAGGTTTGGTTTGGGGAAGATGCTGGGGGCGGTGGAGAAGTTCCGGTTGACTCACGTGGTGACGGCGCCGCCGGTAGTGGTGGCGATGAGCAGAGAAGGAGTGACGGAGGGGTATGATTTGACGTCATTGAAGGTCGTCATTTGTGGTGGTGCTCCGCTTGGGAATCACAACGCCACGGTTTTTAAATCCAAGTTACCTGGAGTGCTGCTCAGCCAGGGATATGGGTTAACTGAATCAACAGCCGGAGCTATCCGAACAACAGGTCCGGAGGAGGCTAACCGGGCAGGAACAACAGGTAGGCTGGTATCTGGGATGGAAGCAAAAATAGTGAACCCCAACACAGGAGAGGCCATGTTTCCTGGTGAACAAGGGGAACTCTGGATTAGAGGACCTACAATTATGAAAGGGTATGTTGGTGACCCAGAGGCAACTTCTGTTACATTGCAGGACGGGTGGCTGAGGACTGGGGATCTTTGCTATTTCGACAATGAGGGTTTCATGTATGTTGTGGACAGGTTGAAAGAATTGATCAAATACAAGGGCTACCAGGTGGCCCCTGCAGAGCTAGAACAATTGCTCCAGTCTCACCCAGAGATAAACGATGCTGCTGTTATTCCATACCCTGATGAAGATGCTGGCCAGGTGCCCATGGCCTTTGTGGTAAGACAGCCTCAAAGTTGCCTGAGCAAAGCAGAAATAATAGATTTTGTAGCCAAACAGGTTGCACCATACAAGAAAATAAGGAGTGTAGCATTTATCGATTCCATACCAAAGAATGCAGCAGGGAAAATACTGAGGAAGGACTTAAATAAATTTGTTCTCGGACGATCATGCTCTAGGTTATAA 1641 0.5253 MEDKARICTVDPKSGFNSASKIFHSLRRPLNLPPSNATISAAAYTLSLRHNSPWSDSVIALIDSATCHQLSYSDFIHCSQTLATNLTTLHGLTKGHTAFILSPNLIQVPILYLALLSIGVVLSPANPTSTRSEISNLLKLSQPVIAFTTSFSANKLQSLPLGTILLDSPEFDSLLKTASSIPPPNAEVSQSDVAAVLYSSGTTGKSKGVMLTHRNLTAMVAISDTVRVQTEGPAVYLHTAPYFHVYGFTSILRSVAMMDTVVVMERFGLGKMLGAVEKFRLTHVVTAPPVVVAMSREGVTEGYDLTSLKVVICGGAPLGNHNATVFKSKLPGVLLSQGYGLTESTAGAIRTTGPEEANRAGTTGRLVSGMEAKIVNPNTGEAMFPGEQGELWIRGPTIMKGYVGDPEATSVTLQDGWLRTGDLCYFDNEGFMYVVDRLKELIKYKGYQVAPAELEQLLQSHPEINDAAVIPYPDEDAGQVPMAFVVRQPQSCLSKAEIIDFVAKQVAPYKKIRSVAFIDSIPKNAAGKILRKDLNKFVLGRSCSRL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi69g00004 546 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Sebi69g00004 546 Gene3D - 440 539 IPR045851 -
Sebi69g00004 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 17 536 - -
Sebi69g00004 546 FunFam 4-coumarate--CoA ligase 2 440 541 - -
Sebi69g00004 546 Pfam AMP-binding enzyme 59 444 IPR000873 -
Sebi69g00004 546 CDD 4CL 33 534 - -
Sebi69g00004 546 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Sebi69g00004 546 Gene3D - 31 439 IPR042099 -
Sebi69g00004 546 SUPERFAMILY Acetyl-CoA synthetase-like 58 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi69g00004 Sebi-Chr69 87155 93226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi69g00004 10 546 Monolignol Biosynthesis Gene Families AT5G63380 51.264 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi69g00004 K01904 - gmx:100801143 707.983