Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi69g00003 ATGGGTAAGCAGCAGAAGGTAGCTATGGAAATTGCAGTCCAAGAGTTCAATCACTTGAGTTGTTCTAAGCTGGTTTTGAAGATAAAAAATTCCAAAGGGATATCAACTCAAGCAGTTGCTGCTATAGATCTTGCACAGAACGAGGAGGTGATAGCCATCATAGGAACAATAACACACAACGAAGCAACTCTGGCAAGTGAAATTAATAAGAAGATAAAGAACATTCCTATCTTGTCTTTAACTTCACCTGCAGCCCCTAGAAGAGAGCTATTATCTCCTCTATTGCCATACTTCATCCAAATGGGCAATGATATCAGCCTTCACATACAATGCATTGCAGCCATTGTAGGAGAGTTCAAATGGCAAAAGGTGACACCAATCTATGAACTTAATAATGGGATTTCCTCTGATCTAGCAATACTAATTGGTCTCTCCTATACCCTTCAACTTGTTAGTTCTGAGATTGATAGCTATTTAGCTTTGCCTCCCTTATCCACTCTGTCAGACCCAAAATCTATGATTGAACATAAGCTTAATAAGCTGAAAAGGAAGAGTAACAGGGTTTTCTTGATTGTGCAATCTTCTTTAGAGATGGCTAACTTGGTTTTTGAGAAAGCAAAGCAAATGGGTATGATGGAAAAAGGTTATGTGTGGGTTATCCCAGAGGGGGTTGCTGGCCTTCTTGATTCAGTTAACTCATCAGTTATCTTTAACATGCAAGGTGCTATTGGATTTAAAACACACCACATAGAAATGAGTGAGACATTTAGACAGTTCAAATTCAAATACAGAAGAAGGTTTGCATTAGAGTACACTGAAGAAGAAAGCATTGACCCAAGTATCTTTGCAGTTCTATCATATGATGCAACTTGGACTATTGCTCAGGCTGCAAAGAAATTACAAGGAAGGTTCAGCCAGGAAGAATTTTCAGAAAAGATTCTGTCCAGTGATTTTGAGGGACTAAGTGGAAAGACTAGCTCCAGAAAAGGAAAATTACAGGAATCACCAACTTTCAGTATAATAAATGTGATTGGGAAAAGCTACATAGAGTTGGCATTTTGGTCTCCAGTAATTGGTTTCTCCAAGAACCTTGTGAGACATCAGCTAATGGAGGTGACTGTAAATAATGATTCAACTGGAGTTATGGGTGTAGTTCATTGGCCTGGAGGCTTACTATCTGTTCCTAATGGATGGACTAATAGTAGTAATGAGGCAAGGTTATTGAAAATAGGAGTGCCTGCACAAGGTGCCTTTAACCAATTTGTCAATGTAACCTATGATCAGAGCAGGAATTCAACTTCCATCACTGGTTTTTCAATTGATGTCTTCAAAGCAGCTGTTAAACGTCTGCCTTATCACTTACCATATGTATTTGTTCCTTTCCATGGCTCTTATGATGAAATGGTTGAGCAAGTCCACAAAAAGGAATTTGATGCTGCTGTTGGAGATACAGAAATAATGGCATATAGATATCGCCTTGTAGAATTTACACAACCATATGTTGAATCTGGCCTTGATATGGTGGTTACTGAGGATAAATCAAAACAAACGTGGATGGTTTGGAAAGCCTTTAGAAAAGAGATGTGGTTGATGATGGTAGCAATGCATATTTTTGTTGGATTTGTTATTTGGTTTATTGAACGGGAAGTCAATGCAGAACTAAAAGGGTTAGGGGCCATGCTTTGGTTTTTAGTTACAGTAATTTTCTATGCACACAGAGAACCAATAAGAAGCCCTGTGGCTCGAGCTGTGCTGGGGCCATGGTTATTTGTGATCTTCATTATAACAACCAGTTTTGGATCAAGTTTAACAACCATGATGACCATCTCACAACTAGAACCATCTGTGTTAGATATCCAGACCCTTCAGAGAACAAATGCCATGGTTGGCTGTAATGGAAATTCTTTTATTGTGAGGTATTTGATTGAAGTACTCAAGTTCAAGCCTGAGAACATTAGGAGAATCAATTCCATAAGTGATTACCCTGCAGCCTTTGAGAATAAGGATATAAAAGCTGCTTTCTTTGTTGCACCTCATGCTAAAGTCTTCCTTGCAAAGTACTCATGTAAGGGCTTCATCAAAGCAGGGAACACCTTCAAGCTTGGTGGCTTTGGTTTTGTGGGTTCCTCTCCTCTTTGTCACTATTCTATTATGACATGCATGGTATTTCCTAAAAGTAACACTCTGGCTGCTGACATATCAGAGGCATTACTTACAATGATAGAGAGTGGAGAAACAGAACAACTAGAGAAAGTTATGCTATCCACTGCTAGTTGCTCTCCTTCAGACAGTGATGAAAATGTTGGGTTAGGTTTTCAGCCTTTCCTTGGCCTATTTTACATCTGTGGTACTATTGCTGGACTGGGATTGTTATATGCCATGATGTGTTTAGTTGTGAAGAATGTAGAGACCTTGATGACCCACATACAAGTTCCATTGGCACAATTAAGGAGAATATGGAGATTGACAAACACATTTTTGGCTCAGAGCTATTCAAAACTCCAACTCAGGAGAAGAATAAGTCCAGCCATTGAAACAAGAAATGCAGAGGAGACAGAGAGTAATAGGGAGCAAAATCCAGCTATCGTTGAACTAAATGTAATAATGGTTCCTCATGCTTCCTGA 2625 0.3912 MGKQQKVAMEIAVQEFNHLSCSKLVLKIKNSKGISTQAVAAIDLAQNEEVIAIIGTITHNEATLASEINKKIKNIPILSLTSPAAPRRELLSPLLPYFIQMGNDISLHIQCIAAIVGEFKWQKVTPIYELNNGISSDLAILIGLSYTLQLVSSEIDSYLALPPLSTLSDPKSMIEHKLNKLKRKSNRVFLIVQSSLEMANLVFEKAKQMGMMEKGYVWVIPEGVAGLLDSVNSSVIFNMQGAIGFKTHHIEMSETFRQFKFKYRRRFALEYTEEESIDPSIFAVLSYDATWTIAQAAKKLQGRFSQEEFSEKILSSDFEGLSGKTSSRKGKLQESPTFSIINVIGKSYIELAFWSPVIGFSKNLVRHQLMEVTVNNDSTGVMGVVHWPGGLLSVPNGWTNSSNEARLLKIGVPAQGAFNQFVNVTYDQSRNSTSITGFSIDVFKAAVKRLPYHLPYVFVPFHGSYDEMVEQVHKKEFDAAVGDTEIMAYRYRLVEFTQPYVESGLDMVVTEDKSKQTWMVWKAFRKEMWLMMVAMHIFVGFVIWFIEREVNAELKGLGAMLWFLVTVIFYAHREPIRSPVARAVLGPWLFVIFIITTSFGSSLTTMMTISQLEPSVLDIQTLQRTNAMVGCNGNSFIVRYLIEVLKFKPENIRRINSISDYPAAFENKDIKAAFFVAPHAKVFLAKYSCKGFIKAGNTFKLGGFGFVGSSPLCHYSIMTCMVFPKSNTLAADISEALLTMIESGETEQLEKVMLSTASCSPSDSDENVGLGFQPFLGLFYICGTIAGLGLLYAMMCLVVKNVETLMTHIQVPLAQLRRIWRLTNTFLAQSYSKLQLRRRISPAIETRNAEETESNREQNPAIVELNVIMVPHAS 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi69g00003 874 FunFam Glutamate receptor 108 277 - -
Sebi69g00003 874 Pfam Bacterial extracellular solute-binding proteins, family 3 432 751 IPR001638 -
Sebi69g00003 874 Pfam Receptor family ligand binding region 6 344 IPR001828 -
Sebi69g00003 874 SMART GluR_14 409 756 IPR001320 GO:0015276|GO:0016020
Sebi69g00003 874 SUPERFAMILY Periplasmic binding protein-like II 382 751 - -
Sebi69g00003 874 FunFam Glutamate receptor 403 517 - -
Sebi69g00003 874 Gene3D - 106 276 - -
Sebi69g00003 874 Gene3D - 503 515 - -
Sebi69g00003 874 SUPERFAMILY Periplasmic binding protein-like I 2 398 IPR028082 -
Sebi69g00003 874 Gene3D - 1 105 - -
Sebi69g00003 874 PIRSF IGluLR_plant 1 866 IPR017103 -
Sebi69g00003 874 Gene3D - 517 656 - -
Sebi69g00003 874 Pfam Ligand-gated ion channel 752 783 IPR001320 GO:0015276|GO:0016020
Sebi69g00003 874 CDD PBP1_GABAb_receptor_plant 1 364 IPR044440 -
Sebi69g00003 874 FunFam Glutamate receptor 517 650 - -
Sebi69g00003 874 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 836 IPR015683 -
Sebi69g00003 874 CDD GluR_Plant 408 754 - -
Sebi69g00003 874 Gene3D - 430 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi69g00003 Sebi-Chr69 76034 80862 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi69g00003 8 796 Ion Channels AT5G11180 28.894 1.36e-105 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi69g00003 - - gmx:100777873 1084.71