Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi69g00001 ATGGGAAGGAGTTCTCCAATGTCACTCATTATGTGCTTCTTTGTTCTGCACTTGTTAGCATGGTCAAGGGTGCTACTAGCTAATGAAGAAAGAGGCCACTGTTTAGTCCCACCAAGGCCCATTATGAGCATAGGTTCTGTGCTTGATTTGGGTTCACTAATGGGTAAACATCAGAAGATAGCAATGGAAATTGCAGTTCAAGAGTTCAACCGCTTGAGCTGTTCCAAGCTGAATTTAAAGATAAAAGATTCCGGTGGGAACTCGGCTCAAGCAATTGCTAGTGCTATGGATCTGGCGCAGAGCAACCAAGTGCTAGCCATCATAGGAACAATCACAAAAAGCGAAGCAACTCTGGCATGTGAATTAAGTGAGACCATAAAGAAGGTTCCTATCTTGTCTCTAACTTCACCTGCAGCCACAACATTATCATCTCCTCAATTGCCACACTTCATCCAAGTTGGAGAAGATGTCAATCTTCACATGAAATGCATTGCAGCTATTGTAGGAGAATTCAGGTGGCAAAAGGTGACACCAATCTATGAACTCAGTAACGGGTTTTCCTCTGATCCAGGGATATTGTTTAGCCTCTCCTATTCTCTTCGACTTGTTGGCTCTGAGATTGAAAACCATTTAGCTTTGCCTTCCTTATCCACTCTATCAGACCCAAAATCAATTATTGAAAATGAGCTTAGTAAGCTTAAGAGGAAAAGTAACAGGGTTTTCTTGATTGTACAATCTTCTTTAGAGATGGCTAACTTGGTTTTTGAGAAAGCAAAGCAAATGGGTTTGATGGGAAAAGGTTCTGTGTGGGTTATCCCAGATGGGGTTGCTAGCCTTCTTGATTCAGTTAACTCATCAGTTATCTTTAACATGCAAGGTGTTTTGGGGTTTAAAACACACTTTATGGAAACGAGTGACACATTTAGAAAGTTCAAGTTCAAGTTTAGGAGAAGGTTTACATTAGAATACCCTGAAGAAGAGAACATTAACCCAAGCATCTTTGCACTCCAAGCATATGATGCAACTTGGACTATTGCTCAGGCTGCAAATAAATCACAAGGAAAGTTCAGCTTAGAAGAATTCACAGAAAAGATTCTGTCTAGTAAATTTGACAGACTAAGTGGAAAGACTAGCTCCAAGAATGATAAATTACTGCAATCACCAACCTTCAATATAATTAATGTGATAGGAAAGAGTTACAGAGAATTGACATTTTGGTCTCCATCACATGGTTTTTCCAAGAACATTGTTAGACATAAAGAAATGGAGATAAACACAGATAATGGTTCTGCTGGAGTTTTCAGAACAGTTTATTGGCCTGGAGACTCACAATCGGTTCCTAAAGGATGGACACACAGTAATGAGGAAAGGAAATTGAAAATAGGAGTGCCTGCCAAAGGTGCCTTTACTCAGTTTGTGAATGTGACATATGATCAGAGTAGGAATGAAACTTCCTTCTCTGGTTTCTCAATCAGTGTCTTCAAAGCAGCTGTTAAACGTTTGCCTTATAACTTGCCATACTTGTTTGTTCCTTTCAATGGTTCTTATGATGAAATGGTTGATCATGTTTACAATAAGACCTTGGATGCTGCTGTCGGAGACACATCAATAATGGCATATAGATATCATTTAGTTGATTTCTCACAACCATATGTTGAATCTGGCCTTGACATGGTGGTTACTGAGCAATCAACTAAATTAAAAGGAACATGGATATTTTTAGAAGCTTTTACAAAAGAGATGTGGTTGATGATGGTAGCTATGCACATTTTGTGGGATTTGTTATTTGGTTGA 1794 0.3907 MGRSSPMSLIMCFFVLHLLAWSRVLLANEERGHCLVPPRPIMSIGSVLDLGSLMGKHQKIAMEIAVQEFNRLSCSKLNLKIKDSGGNSAQAIASAMDLAQSNQVLAIIGTITKSEATLACELSETIKKVPILSLTSPAATTLSSPQLPHFIQVGEDVNLHMKCIAAIVGEFRWQKVTPIYELSNGFSSDPGILFSLSYSLRLVGSEIENHLALPSLSTLSDPKSIIENELSKLKRKSNRVFLIVQSSLEMANLVFEKAKQMGLMGKGSVWVIPDGVASLLDSVNSSVIFNMQGVLGFKTHFMETSDTFRKFKFKFRRRFTLEYPEEENINPSIFALQAYDATWTIAQAANKSQGKFSLEEFTEKILSSKFDRLSGKTSSKNDKLLQSPTFNIINVIGKSYRELTFWSPSHGFSKNIVRHKEMEINTDNGSAGVFRTVYWPGDSQSVPKGWTHSNEERKLKIGVPAKGAFTQFVNVTYDQSRNETSFSGFSISVFKAAVKRLPYNLPYLFVPFNGSYDEMVDHVYNKTLDAAVGDTSIMAYRYHLVDFSQPYVESGLDMVVTEQSTKLKGTWIFLEAFTKEMWLMMVAMHILWDLLFG 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi69g00001 597 CDD PBP1_GABAb_receptor_plant 43 416 IPR044440 -
Sebi69g00001 597 FunFam Glutamate receptor 160 329 - -
Sebi69g00001 597 SUPERFAMILY Periplasmic binding protein-like I 42 450 IPR028082 -
Sebi69g00001 597 FunFam Glutamate receptor 454 568 - -
Sebi69g00001 597 Gene3D - 452 576 - -
Sebi69g00001 597 SUPERFAMILY Periplasmic binding protein-like II 435 585 - -
Sebi69g00001 597 Gene3D - 159 331 - -
Sebi69g00001 597 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 43 591 IPR015683 -
Sebi69g00001 597 Pfam Receptor family ligand binding region 59 396 IPR001828 -
Sebi69g00001 597 Pfam Bacterial extracellular solute-binding proteins, family 3 483 565 IPR001638 -
Sebi69g00001 597 Gene3D - 39 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi69g00001 Sebi-Chr69 10489 13175 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi69g00001 42 587 Ion Channels AT5G11180 32.247 1.01e-80 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi69g00001 - - gmx:100778941 815.453