Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi698g00021 ATGCAAGCAGACGAGGATGTTGGAAAGATAGCATTGGCTGTGCCTGTTTTAGTTTCTAAAGCTCTAGAGCTATTTCTGCAAGATCTTTGTGACCGCACTTATGAAATAACTCTTCAAAGAGGAGCAAAAACCATGAATTCATTGCACTTAAAACATTGTGTACAAAGCTACAATGTCTTTGACTTTCTGAGGGACGTTGTCAGCAGGGTTCCTGACTATGGCCATGGCCATGGCCATGGACATACTGATACTGGTGCTGATGATCGGGCCATTTCAAGAAGAAGGAAAGCAGCTGGTGATGATTGCAATGACAGTGATGAGAAGCTAAGAGAAGCAAGATGCAAGAGTTGGGCCACGCTGGCGGTACTGGTAGGGGAAGAGGCCGCGGTAGAGGAAGAGGACGTGGTCGAGGGTCTCGAGCTGTAG 426 0.4718 MQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYGHGHGHGHTDTGADDRAISRRRKAAGDDCNDSDEKLREARCKSWATLAVLVGEEAAVEEEDVVEGLEL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi698g00021 141 Gene3D Histone, subunit A 1 69 IPR009072 GO:0046982
Sebi698g00021 141 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 94 - -
Sebi698g00021 141 MobiDBLite consensus disorder prediction 74 107 - -
Sebi698g00021 141 SUPERFAMILY Histone-fold 1 70 IPR009072 GO:0046982
Sebi698g00021 141 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 54 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi698g00021 Sebi-Chr698 438433 440472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi698g00021 1 115 CCAAT-HAP5 Transcription Factor Family AT3G12480 73.913 9.08e-62 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Sebi698g00021 CBFD_NFYB_HMF 6.6e-13 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi698g00021 K21752 - twl:119980339 193.356