Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi697g00036 ATGAACTTGAGTAACAGCCCTCAGAAACTGTCTCGGCAGTCATCATCAGGGGCGAAGAAAGAGCCAATTAGCACTTTCCCAAGTGGATGCTGTCGAGGCTTCACCAGCGTTAGGACTGTGACATCAACCGCACAACACCATCACCGTTATGAAAAATTGGAAGCAAAGGTGGCAGATTTGGAAAAAGAGGTGGAAAAGCAAACAGAACTCAGAGTGATGTATAAGAAACGAATGGAAAGGACGCAAGACTACTTAAGGTACTGCCTCCAAATAGAACAGGAGAATGGAATCTTGGACCTCATTATCCGCTCCAAAGGTGAATTTCAACAATCTCCTTCTCCTCTCTCTTTCTACACTATCAACTCTATTACCACCACCAGCCCTCAGGTTCCCACTCCTGTGCACCACCACTCTAATCTAGCGGCCATCATTGATCAAGCCAAAATCAACGGCTGGTATATTAATCCAACCGAGATTGAATTGGAAGAGAAAATAGGGCAGGGAAGCACTGCAGACATTTACAGGGCTACATGGCGTGGATTTGATGTGGCAGTGAAGTGCATTTCTGCTGAATTCTTCCACACAAATGCAAACGGTGTTGAATTCTTTTGTCAGGAACTTGAAACTCTGTCAAAGCAACGACACCGTTTTGTGCTTCATTTGATGGGTGCGTGTCTTGACCCTCCTCATCATGCGTGGGTTGTTACTGAATATCTTAGCACCACGCTGAAGGAGTGGTTATATGGGCCTGGCAAAAGGCGCAAAGATAGAATCGTTCCACTTCCTCCTTTTAAAGACAGAGTAATGAGGGCCTTAGAGATAGCCCAAGCTATGCAGTATCTACATGAACAAAAGCCCAAAGTCATTCACCGTGACTTGAAGCCCAGCAACATTTTCTTGGACGATACCATGCATGTTAGAGTTGCTGATTTTGGACATGCCCGCTTCTTAACTGATGGGGAAATGGCTCTCACCGGAGAAACAGGCATGCTTACACAAATATGTGCATATTACTTTCTAGTTGTATTGATGATTGTGACCCACATTCATATTTGCGATAAATATACATTTTCAGGAACATATGTTTATATGGCACCGGAGGTGATCCGATGTGAGCCCTATAATGAAAAATGTGATGTTTACAGTTTCGGAATCATACTGAATGAGCTTCTCATTGGAAAATACCCCTATATCGAGACAGAATATGGTCCCGCCAAGGTATCATCATCACATTGA 1236 0.4385 MNLSNSPQKLSRQSSSGAKKEPISTFPSGCCRGFTSVRTVTSTAQHHHRYEKLEAKVADLEKEVEKQTELRVMYKKRMERTQDYLRYCLQIEQENGILDLIIRSKGEFQQSPSPLSFYTINSITTTSPQVPTPVHHHSNLAAIIDQAKINGWYINPTEIELEEKIGQGSTADIYRATWRGFDVAVKCISAEFFHTNANGVEFFCQELETLSKQRHRFVLHLMGACLDPPHHAWVVTEYLSTTLKEWLYGPGKRRKDRIVPLPPFKDRVMRALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDTMHVRVADFGHARFLTDGEMALTGETGMLTQICAYYFLVVLMIVTHIHICDKYTFSGTYVYMAPEVIRCEPYNEKCDVYSFGIILNELLIGKYPYIETEYGPAKVSSSH 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi697g00036 411 Coils Coil 43 77 - -
Sebi697g00036 411 Gene3D Phosphorylase Kinase; domain 1 147 239 - -
Sebi697g00036 411 Pfam Protein kinase domain 160 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi697g00036 411 SMART serkin_6 159 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi697g00036 411 SUPERFAMILY Protein kinase-like (PK-like) 147 400 IPR011009 -
Sebi697g00036 411 Gene3D Transferase(Phosphotransferase) domain 1 240 409 - -
Sebi697g00036 411 ProSiteProfiles Protein kinase domain profile. 159 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi697g00036 411 MobiDBLite consensus disorder prediction 1 24 - -
Sebi697g00036 411 ProSitePatterns Protein kinases ATP-binding region signature. 165 186 IPR017441 GO:0005524
Sebi697g00036 411 MobiDBLite consensus disorder prediction 1 22 - -
Sebi697g00036 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Sebi697g00036 411 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 66 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi697g00036 Sebi-Chr697 473753 475335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi697g00036 120 410 MAP Kinase Kinase Kinase AT5G03730 33.106 8.27e-37 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Sebi697g00036 Pkinase 2.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi697g00036 - - gmx:100810435 576.63