Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi697g00035 ATGGATGCTACTAAGCATCAAGGCGGCGAAGTAAGCATGACGGAGAATAAAAGAGAAGTGGTGGTGGCGATTCCAAATGCTGGTGGAGAGAGCCATGAGTTGAAAGGGGTTGAATCTTTAACCCCCAAACATAGCAGGGTGGATTCACCTCACACAATATCCTATGACAACGAGCTTTCTGCAGCATCAAAGTCACCACCTTTGAATTGTGCTTCCCCTGAGATAAGGTTCATTCCCACCAGCCCAAATAAGCCCCCTAAAGTTCCTACTGCCAACACCAACCTCACCCGAAGAAGATCACTTGCAAGGTCAGTGTATTCCAAACCCAAATCAAGGTTTGTTGAACAACCTTATACTATTGATGGGGCCATTTTAGAAGAGAATAGTACTTCAACTTTGCAAGAACAAATGGCTGTTAGTTCACCATTTAGGAACTCTTTTAATAAAGCATCACCTAATAACAAATCCGGGACAGTTAATAGAACTGTTTCCATCACTTCTGTTATCACTCCCAAGACACCATTGATGGCATCTCCTGGGCCTGCTGGGGAGGAGGATCTGGATGAAATCATTTATAGGAAAGTTGAATTGAGTAAAGGCAAGAGTAAGAGACTGAAAGCTAAGGTTTTGATAGAATGGTGGTGTGTGCTTGTGCTGGTGACCTTTTGTGGTATGTTGGTTACCAAGTGGTTCATGCACATTATTGTTTTCTTGATTGAAATGAACTTCTTGTTGAGGAAAAAGGTGCTGTATTTTGTCCATGGACTGAAGAAATGTGTTCAGGTCTTCATTTGGGTTGGCTTGGTTCTTCTCACATGGGTGCTGTTGATTAATCGTGGGGTCCAGCGATCTGAGTTGGCCTCGAAAATTTTGAATGGGGTGACATGGACTCTTGTCTCCCTTCTCATTGGAGCATTCTTGTGGGTCATAAAGACATTGCTGCTAAAGATTTTGGCATCGAATTTTCATGTCAAATCTTTCTTTGATAGAATTCAAGAATCAATCTTCCATCAGTATGTTCTGCAGACTCTCTCTGGGCCTCCACTTATGGAAGAGGCTGAGAAGGTCGGCGGATCGCAGAGTATTGGTCATTTTAGTTTCAGGAGTACGACTGGTAAAGGTGGCACAAAGAAAGAGGTTATTGATATGGCAAAGCTTCACAAGATGAAGCAAGAGAAAGTTTCTGCATGGACTATGAAGATGTTGGTAGATGCAGTGACAAATTCAAGGCTGTCCACAATCTCTAATTCACTAGATGAAAGTTTTTATGATGGAGAAAATGAACAAACTGATAAAGAGATTACAAATGAGATGGAAGCAACTGCTGCTGCCTATTACATTTTTAGAAATGTTGCTGCCCCTGGTTGCACGTACATTGACGAGGATGAACTCCGGAGGTTCATGATTAAGGAAGAAGTGCGTGTGGTATTTCCCCTCCTTGCCCAACCAGATACAGGGCAAATTACCAGAAAGTCATTGACAGACTGGTTGTTGAAGGTATATCAAGAACGTAAAGCATTGGCACATGCCTTAAGTGACACCAAAACAGCTGTTAAAACAATTAAACAAGCTGGTGACTGTGGTCCTACTAGTGGTGACCATAATAGTGTGGCTTCTACTGATGGAGATTGCAACTACAAAACTATCATCTTTGTGTTTGTAATGCATCCGTTTGATGTTGGTGATCGATGTGTTGTAGATGGTGTTCAGCTATTGGTTGAAGAAATGAATATATTGACAACAGTCTTCTTGAAGGCTAATAATGAAAAGGTGTACTTTCCAAACTCTGTCCTGGCCACAAAACCGATTAGCAATTATTACAGAAGCCCAGATATGGGTGACGGTGTAGAGTTCGCGATTGATTTTATGACACCAGCAGAGAAGATCGGGGCACTGAAAGAAAAAATAAAGAGGTACCTGGAGAGAAATCCACAATACTGGCATCCAAATCACAACTTAGTAGTACAGGAGATAGAAAATGTAAATAAGATTAAGATGGCTCTCTTTGTTACCCACACAATGAACTTTCAAGAATTTGGGGAGAAGAACAAGCGGAGAAGTGAACTGGTGATGGAAATAAAGAAAATATTTGAAGAGCTCAATATCAGATACAACCTCCTTCCACAAGATGTTCATCTCAGACATATGGAGCCAGATACCAATGTAATCCATAGATGA 2178 0.4141 MDATKHQGGEVSMTENKREVVVAIPNAGGESHELKGVESLTPKHSRVDSPHTISYDNELSAASKSPPLNCASPEIRFIPTSPNKPPKVPTANTNLTRRRSLARSVYSKPKSRFVEQPYTIDGAILEENSTSTLQEQMAVSSPFRNSFNKASPNNKSGTVNRTVSITSVITPKTPLMASPGPAGEEDLDEIIYRKVELSKGKSKRLKAKVLIEWWCVLVLVTFCGMLVTKWFMHIIVFLIEMNFLLRKKVLYFVHGLKKCVQVFIWVGLVLLTWVLLINRGVQRSELASKILNGVTWTLVSLLIGAFLWVIKTLLLKILASNFHVKSFFDRIQESIFHQYVLQTLSGPPLMEEAEKVGGSQSIGHFSFRSTTGKGGTKKEVIDMAKLHKMKQEKVSAWTMKMLVDAVTNSRLSTISNSLDESFYDGENEQTDKEITNEMEATAAAYYIFRNVAAPGCTYIDEDELRRFMIKEEVRVVFPLLAQPDTGQITRKSLTDWLLKVYQERKALAHALSDTKTAVKTIKQAGDCGPTSGDHNSVASTDGDCNYKTIIFVFVMHPFDVGDRCVVDGVQLLVEEMNILTTVFLKANNEKVYFPNSVLATKPISNYYRSPDMGDGVEFAIDFMTPAEKIGALKEKIKRYLERNPQYWHPNHNLVVQEIENVNKIKMALFVTHTMNFQEFGEKNKRRSELVMEIKKIFEELNIRYNLLPQDVHLRHMEPDTNVIHR 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi697g00035 725 FunFam Predicted mechanosensitive ion channel 557 606 - -
Sebi697g00035 725 PIRSF Memb_At2g17000 4 525 IPR016688 -
Sebi697g00035 725 PIRSF Memb_At2g17000 547 725 IPR016688 -
Sebi697g00035 725 Pfam Mechanosensitive ion channel 550 703 IPR006685 GO:0016020|GO:0055085
Sebi697g00035 725 Gene3D - 557 606 IPR023408 -
Sebi697g00035 725 MobiDBLite consensus disorder prediction 25 49 - -
Sebi697g00035 725 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 60 523 IPR016688 -
Sebi697g00035 725 SUPERFAMILY Sm-like ribonucleoproteins 545 606 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi697g00035 Sebi-Chr697 451258 454648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi697g00035 63 713 Mechanosensitive Ion Channel Family AT5G12080 54.366 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi697g00035 K22048 - gmx:100777617 1061.98