Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi697g00026 ATGGCTACTCATCTGCTCAGGCTTTCTCTCTCCCCACAACCTAAGCTCTGCTTCAATTACACACCCAACCATGACATCCGCTTCATTTCTCTGCTCCCGGGAAAACGACGTCGCAATCGCAACCGCCACCGCCGGGGAATTCTCCGGCCACATTTCGTCGTATCAAACTCCTTTGGTACTAAAATTGGCTCGCCGGAATCAGCTGTTCTTCGAGGCCAGGCACAGAGCAAAGACTCGCCAGTTCTACTCGACGTTACCGGGATGATGTGTGGCGCGTGCGTCTCCCGAGTCAAAAACATCTTGTCCGCCGATGACCGAGTCGACTCGGTCGTGGTCAACATGCTGACCGAGACCGCCGCCGTTAAGTTGAAACAGATGGAGGAGGAACCGACGAGTGTTGCGGAGAGCCTTGCTCGGAGATTGAGCGATTGCGGGTTTCCGACGAAGCGGAGAGCCTCGGGTTCGGGAGTGGCGGAAAATGTGAGGAAGTGGAAGGAGTTGGTGAAGAAGAAGGAGGAACTGGTCGCCAAGAGTCGAAGCCGCGTCGCTTTCGCTTGGACTCTGGTGGCATTGTGCTGTGGATCGCATGCTTCGCATATTTTTCATTCTTTGGGAATTCACATTGCTCATGGATCGTTTTGGGAAATCCTTCATAATTCATATGTGAAAGGTGGTTTAGCTTTGGGCTCTCTATTGGGACCAGGACGAGAGTTACTCTTTGATGGCCTAAACGCGTTTAAGAAGCGGTCTCCAAATATGAACTCCCTCGTGGGATTTGGTTGTATAGCTGCTTTCATCATCAGTTCGATCTCACTACTTAACCCCGAGCTGGCATGGGATGCATCATTCTTTGATGAACCGGTCATGCTTCTTGGTTTCGTGCTTCTAGGACGTTCTCTGGAGGAAAAGGCTAGGATTCAGGCATCTAGTGATATGAATGAACTTCTTTCACTGATATCTACTCAGTCAAGACTTGTGATTACTTCATCAGAAGGTTCACCATCTACTGACAGTGTGCTTGGTGCTGACGCACTTTGTGTTGAAGTCCCAACTGATGATATTCGAGTAGGTGACTCAGTGTTGGTGTTGCCTGGAGAAACTATTCCTATAGATGGAAAGGTCATCTCGGGAAGAAGCGTTGTGGATGAATCGATGCTTACAGGAGAATCACTTCCTGTATTTAAGGAGGAAGGTCTTACAGTTTCAGCGGGAACTATAAATTGGGATGGCCCTTTAAGGATTGAAGCTTCTTCAACTGGCTCCAACACAATGATAGCCAAGATTGTTCGCATGGTTGAGGAAGCTCAATCACGTGAAGCACCTGTACAAAGGCTTGCGGATTCGATAGCAGGGCCATTTGTATACACTGTAATGACTCTGTCAGCAGCAACATTTGCATTTTGGTATTTTATTGGATCACACATATTTCCTGATGTTTTGCTTAATGACATTGCGGGCCCAGAAGGAGATCCTTTACTTTTGAGTTTAAAACTCTCTGTAGATGTTTTGGTTGTTTCTTGTCCTTGTGCACTGGGTCTTGCCACACCAACAGCAATACTGGTTGGCACCTCACTTGGGGCAAGAAAAGGGCTTCTTATTAGAGGAGGAGATGTGCTGGAACGCTTGGCCAATGTAAAGTATATTGCTTTAGACAAGACAGGAACTCTCACCAGAGGGAAACCAGTTGTGTCTGCCATAAGTTCTATTCATTATGGAGAGTCAGAAATTCTTCAGATTGCTGCTGCAGTGGAGAAAACTGCTTCTCATCCAATTGCAAAGGCTATTGTCAATAAAGCTGAGTCTTTAGAGTTGGTCCTTCCAGTCACAAAAGGACAGTTAGTTGAACCAGGGTTTGGAACCTTAGCAGAAATAGACGGGGGTTTGATTGCAGTGGGGTCTTTAGAATGGGTCCATGAACGCTTCCACACTAGAATAAACCCATCCGATTTGATGAATCTGGAACAGACTTTGATAAATCATTCATCAAATACAACATCTTCAAAGTATTCAAAAACTGTTGTCTACGTTGGACGTGAAGGAGAAGGCATCATTGGCGCTATTGCCTTATCTGACATTGTACGTGAAGATGCTGAATCTACTGTAATGAGGCTCAAGCAGAAGGGGATTAAAATGGCCCTCATATCAGGAGACAGGGAAGAAGCAGTTGCAACAATAGCAGAGACAGTTGGAATTGAAAATGATTTTGTCAAAGCATCTCTGTCTCCACAGCAGAAATCTGGATTTATTTCATCTCTGAAAGCTGCTGGACATCATGTTGCGATGGTAGGTGATGGGATAAATGATGCACCTTCTTTGGCTGTAGCTGATGTTGGGATTGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCAGATGCAGCATCCATTATACTGCTGGGGAACAAAATTTCACAAGTTGTCGATGCACTAGACCTAGCACAGGCAACAATGGCGAAAGTGTACCAAAACTTGTCTTGGGCAGTAGCCTACAATGTTGTTGCCATTCCCGTTGCTGCCGGTGTGTTACTTCCCCAGTTTGACCTTGCCATGACACCTTCACTTTCAGGAGGACTGATGGCTCTGAGCTCCATCTTCGTGGTTAGCAACTCACTGCTTCTACAGCTTCATGGGTCTCAGACCTCCAGTAAGGGCTCACTCTAG 2661 0.466 MATHLLRLSLSPQPKLCFNYTPNHDIRFISLLPGKRRRNRNRHRRGILRPHFVVSNSFGTKIGSPESAVLRGQAQSKDSPVLLDVTGMMCGACVSRVKNILSADDRVDSVVVNMLTETAAVKLKQMEEEPTSVAESLARRLSDCGFPTKRRASGSGVAENVRKWKELVKKKEELVAKSRSRVAFAWTLVALCCGSHASHIFHSLGIHIAHGSFWEILHNSYVKGGLALGSLLGPGRELLFDGLNAFKKRSPNMNSLVGFGCIAAFIISSISLLNPELAWDASFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVITSSEGSPSTDSVLGADALCVEVPTDDIRVGDSVLVLPGETIPIDGKVISGRSVVDESMLTGESLPVFKEEGLTVSAGTINWDGPLRIEASSTGSNTMIAKIVRMVEEAQSREAPVQRLADSIAGPFVYTVMTLSAATFAFWYFIGSHIFPDVLLNDIAGPEGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLANVKYIALDKTGTLTRGKPVVSAISSIHYGESEILQIAAAVEKTASHPIAKAIVNKAESLELVLPVTKGQLVEPGFGTLAEIDGGLIAVGSLEWVHERFHTRINPSDLMNLEQTLINHSSNTTSSKYSKTVVYVGREGEGIIGAIALSDIVREDAESTVMRLKQKGIKMALISGDREEAVATIAETVGIENDFVKASLSPQQKSGFISSLKAAGHHVAMVGDGINDAPSLAVADVGIALQNEAQENAASDAASIILLGNKISQVVDALDLAQATMAKVYQNLSWAVAYNVVAIPVAAGVLLPQFDLAMTPSLSGGLMALSSIFVVSNSLLLQLHGSQTSSKGSL 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi697g00026 886 SFLD p-type atpase 532 815 IPR044492 -
Sebi697g00026 886 SUPERFAMILY Calcium ATPase, transmembrane domain M 285 543 IPR023298 -
Sebi697g00026 886 Gene3D - 560 693 IPR023299 GO:0000166
Sebi697g00026 886 SUPERFAMILY HAD-like 547 870 IPR036412 -
Sebi697g00026 886 CDD P-type_ATPase_HM 181 872 - -
Sebi697g00026 886 SUPERFAMILY Calcium ATPase, transduction domain A 344 432 IPR008250 -
Sebi697g00026 886 Pfam Heavy-metal-associated domain 83 146 IPR006121 GO:0046872
Sebi697g00026 886 NCBIfam HAD-IC family P-type ATPase 346 846 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi697g00026 886 ProSiteProfiles Heavy-metal-associated domain profile. 79 149 IPR006121 GO:0046872
Sebi697g00026 886 CDD HMA 83 147 IPR006121 GO:0046872
Sebi697g00026 886 Pfam E1-E2 ATPase 339 529 - -
Sebi697g00026 886 FunFam Copper-transporting ATPase PAA2, chloroplastic 560 693 - -
Sebi697g00026 886 Gene3D - 540 813 IPR023214 -
Sebi697g00026 886 ProSitePatterns E1-E2 ATPases phosphorylation site. 551 557 IPR018303 -
Sebi697g00026 886 Pfam haloacid dehalogenase-like hydrolase 545 776 - -
Sebi697g00026 886 SFLD Haloacid Dehalogenase 532 815 - -
Sebi697g00026 886 Gene3D - 72 152 - -
Sebi697g00026 886 PRINTS P-type cation-transporting ATPase superfamily signature 707 717 - -
Sebi697g00026 886 PRINTS P-type cation-transporting ATPase superfamily signature 549 563 - -
Sebi697g00026 886 PRINTS P-type cation-transporting ATPase superfamily signature 382 396 - -
Sebi697g00026 886 PRINTS P-type cation-transporting ATPase superfamily signature 762 781 - -
Sebi697g00026 886 PRINTS P-type cation-transporting ATPase superfamily signature 685 696 - -
Sebi697g00026 886 FunFam Copper-transporting ATPase 1, putative 305 436 - -
Sebi697g00026 886 PANTHER ATP7, ISOFORM B 74 875 - -
Sebi697g00026 886 NCBIfam heavy metal translocating P-type ATPase 253 873 IPR027256 GO:0006812|GO:0016020|GO:0019829
Sebi697g00026 886 SUPERFAMILY HMA, heavy metal-associated domain 80 147 IPR036163 GO:0046872
Sebi697g00026 886 Gene3D - 305 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi697g00026 Sebi-Chr697 358631 373280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi697g00026 244 874 Primary Pumps ATPases AT1G63440 37.227 3.96e-112 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi697g00026 K17686 - gmx:100127402 1469.91