Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi697g00024 ATGGCATTTCGGTTTGAACTTCTCCTTCTGGTTTCTCTCGTTTCTTTGAATTCAATCAATTCGGTGGATTCAAACGATGGAGCAACATTGTTGGAGATAAAGAAGTCATTGAGGGATGTGGATAATGTTCTATATGACTGGACAAACTCACCATCATCGGATTATTGTGTCTGGAGAGGGGTCACATGTGATAATGTCACCTTCAATGTCATTGCACTCAATCTTTCAGGGTTGAATCTTGAGGGCGAAATTTCACCTGCAATAGGGAGCCTTAACAGCTTGGTCTCTATTGATTTCAAGGAAAACAGTCTGTCTGGTCAGATACCAGATGAGATTGGTGCTTGTTCTTCTTTGAAAAGCCTGGATTTGTCATTTAATGAGATTCGGGGAGATGTACCATTTTCAATTTCCAAGTTGAAACAACTGGAAAATCTGATTTTGAAAAATAACCAGCTAATTGGACCAATTCCTTCAACTCTGTCTCAGATTCCTAATTTGAAGATTCTAGACTTGGCACAAAATAATCTCAGCGGGGAGATACCAAGGCTTATATACTGGAATGAAGTTTTGCAATATCTTGATGTGAGAAACAATAGCTTGACTGGCAGTATTCCTGAAAACATAGGCAACTGTACTGCCTTCCAGGTCTTGGATTTATCGTACAACCAACTAACTGGAGAGATACCATTCAATATTGGATTTTTGCAAGTAGCGACCCTGTCATTGCAAGGCAATAAACTCTCAGGGCATATTCCATCAGTGATTGGTCTGATGCAAGCACTCGCTGTCTTAGATTTGAGTTGCAACATGTTAACTGGACCAGTCCCTCCTGTCTTGGGAAATTTGACCTACACAGAAAAATTGTATTTGCATGGAAACAAACTGACTGGCCTGATCCCCCCGGAGCTAGGAAATATGACAAAGCTTCACTATTTGGAATTGAATGACAACCATTTAAGTGGACATATCCCACCTGAGCTTGGAAAGCTTTCTGATCTGTTTGACTTAAATGTTGCTAACAACAACCTTGAGGGTCCAATTCCTAATAATATTAGCTCGTGTAAAAATCTTAACAGCCTCAATGTGCATGGGAATAAGTTGAGTGGAACAATCCCCTCAGCTTTTCAAAGCTTGGAGAGTATGACCTATTTGAATCTTTCTTCCAACAATCTTCAAGGCCCCATTCCAATTGAACTGTCACGGATTGGTAATTTGGATACCTTAGATATTTCAAATAATAATATAAGCGGTTCCATTCCTTCTTCCCTTGGTGACTTAGAACATCTTCTAAAGCTGAATCTAAGCAGAAATCATATAACTGGGTTTATTCCAGCAGAATTTGGTAATCTAAGAAGTGTCATGGATATTGATCTTTCAAATAATCAACTTTCTGGCTTGATTCCTGGAGAACTTAGTCAGCTTCAGAACATGATATCCTTGAGACTTGAAAACAACAGATTATCTGGGGAGGTGACATCACTTGTGAATTGCCTTAGTCTTTCTTTGCTCAATGTCTCCTATAACAACCTAGTTGGTATTGTTCCCACAAGCAACAATTTTTCCAGGTTTTCCCCTGACAGTTTTATTGGAAACCCTGCTCTTTGTGGCTATTGGCTGAATTCGCCTTGTAATGGGTCTCATGCTCCCGTACGAGTTACATTGCCTAAGGCAGCTATTCTAGGAATTGCTCTTGCTGCCCTCGTGATTCTTCTTATGATATTGCTGGCAGCTTGCCGACCACACAATCCTGCTCCTTTTCCTGATGGATCATTTGACAAGCCAGTTAATTATTCACCTCCAAAGCTAGTGATTCTTCACATGAATATGGCACTTCATGTGTATGATGATATCATGAGGATGACTGAAAACCTGAGTGAGAAATACATGATTGGATATGGTGCTTCAAGTACAGTTTATAAATGTGTACTTAAGAATTGCAAGCCAGTGGCTATCAAGAAGCTTTATTCTCACTATCCACAATACTTGAAAGAATTTGAGACTGAGCTTGAGACAGTTGGCAGCATTAAGCACCGGAATCTGGTCAGTCTCCAAGGCTACTCTCTGTCTCCATTTGGAAACCTTCTCATCTATGACTACATGGAAAATGGCAGTCTATGGGATCTTCTTCATGTTAAGGTCTACATGTCACTCAGGGTGCTACCACATGTTGGGCCATTGGTAGATCTACATGGCCATGAGCTAATGAGACGCCGGATGGGTCAATGCCAAATTCTGTCCAAGACAGCTAACGATGCCGTGATGGAAACAGTTGATCCGGATATTATTGCCACATGCAAGGACATGGGAGCAGTAAAAAAGGTTTTTCAGCTTGCCCTTTTATGCACAAAGAGGCAGCCAGCTGATAGGCCTACAATGCATGAAGTGTCACGCGTGCTGGGAAGTCTTGTGCCATCCATCACTCCAACACAAGTACTGCTGCCTGATTCACAGCCATCTGCTACTAAGGTACAATGCTACAAGGATGAGTATGCAAATCTCAAAACTCCACACTTGGTGAACTTCCCAACCATGAGCACCTCTGATGCTCAACTCTTCCTCAAGTTTGGAGAGTTAAAGTAG 2580 0.4128 MAFRFELLLLVSLVSLNSINSVDSNDGATLLEIKKSLRDVDNVLYDWTNSPSSDYCVWRGVTCDNVTFNVIALNLSGLNLEGEISPAIGSLNSLVSIDFKENSLSGQIPDEIGACSSLKSLDLSFNEIRGDVPFSISKLKQLENLILKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLDVRNNSLTGSIPENIGNCTAFQVLDLSYNQLTGEIPFNIGFLQVATLSLQGNKLSGHIPSVIGLMQALAVLDLSCNMLTGPVPPVLGNLTYTEKLYLHGNKLTGLIPPELGNMTKLHYLELNDNHLSGHIPPELGKLSDLFDLNVANNNLEGPIPNNISSCKNLNSLNVHGNKLSGTIPSAFQSLESMTYLNLSSNNLQGPIPIELSRIGNLDTLDISNNNISGSIPSSLGDLEHLLKLNLSRNHITGFIPAEFGNLRSVMDIDLSNNQLSGLIPGELSQLQNMISLRLENNRLSGEVTSLVNCLSLSLLNVSYNNLVGIVPTSNNFSRFSPDSFIGNPALCGYWLNSPCNGSHAPVRVTLPKAAILGIALAALVILLMILLAACRPHNPAPFPDGSFDKPVNYSPPKLVILHMNMALHVYDDIMRMTENLSEKYMIGYGASSTVYKCVLKNCKPVAIKKLYSHYPQYLKEFETELETVGSIKHRNLVSLQGYSLSPFGNLLIYDYMENGSLWDLLHVKVYMSLRVLPHVGPLVDLHGHELMRRRMGQCQILSKTANDAVMETVDPDIIATCKDMGAVKKVFQLALLCTKRQPADRPTMHEVSRVLGSLVPSITPTQVLLPDSQPSATKVQCYKDEYANLKTPHLVNFPTMSTSDAQLFLKFGELK 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi697g00024 859 ProSiteProfiles Leucine-rich repeat profile. 165 187 IPR001611 GO:0005515
Sebi697g00024 859 ProSiteProfiles Leucine-rich repeat profile. 404 427 IPR001611 GO:0005515
Sebi697g00024 859 SUPERFAMILY L domain-like 236 523 - -
Sebi697g00024 859 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 275 546 - -
Sebi697g00024 859 SUPERFAMILY L domain-like 26 300 - -
Sebi697g00024 859 ProSitePatterns Protein kinases ATP-binding region signature. 630 653 IPR017441 GO:0005524
Sebi697g00024 859 Pfam Leucine rich repeat 336 391 IPR001611 GO:0005515
Sebi697g00024 859 Pfam Leucine rich repeat 404 463 IPR001611 GO:0005515
Sebi697g00024 859 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Sebi697g00024 859 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515
Sebi697g00024 859 SUPERFAMILY Protein kinase-like (PK-like) 597 714 IPR011009 -
Sebi697g00024 859 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 188 274 - -
Sebi697g00024 859 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 23 187 - -
Sebi697g00024 859 ProSiteProfiles Protein kinase domain profile. 624 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi697g00024 859 Gene3D Ribonuclease Inhibitor 189 235 IPR032675 -
Sebi697g00024 859 Gene3D Ribonuclease Inhibitor 23 188 IPR032675 -
Sebi697g00024 859 SMART LRR_typ_2 450 473 IPR003591 -
Sebi697g00024 859 SMART LRR_typ_2 91 115 IPR003591 -
Sebi697g00024 859 SMART LRR_typ_2 426 449 IPR003591 -
Sebi697g00024 859 SMART LRR_typ_2 163 187 IPR003591 -
Sebi697g00024 859 SMART LRR_typ_2 378 402 IPR003591 -
Sebi697g00024 859 SMART LRR_typ_2 306 330 IPR003591 -
Sebi697g00024 859 SMART LRR_typ_2 258 282 IPR003591 -
Sebi697g00024 859 Gene3D Ribonuclease Inhibitor 236 322 IPR032675 -
Sebi697g00024 859 Gene3D Ribonuclease Inhibitor 419 545 IPR032675 -
Sebi697g00024 859 Gene3D Ribonuclease Inhibitor 323 418 IPR032675 -
Sebi697g00024 859 Gene3D Phosphorylase Kinase; domain 1 597 699 - -
Sebi697g00024 859 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 595 699 - -
Sebi697g00024 859 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Sebi697g00024 859 Pfam Protein kinase domain 627 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi697g00024 859 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 287 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi697g00024 Sebi-Chr697 323951 341043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi697g00024 744 803 Receptor kinase-like Gene Family AT5G07180 65.000 1.65e-16 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Sebi697g00024 Pkinase 6.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi697g00024 K20718 - cpap:110809270 1297.72