Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi697g00023 ATGCCCGAACCTGCCATGAATCTGCGCAAGGGCTCTAAGGTTTGGGTCCATGACAAAGATTGGGCTTGGTTGCCAGCAGAAGTACTCGAATATGCCGGTAAGCAAGTTCGCCTTGCAACCTCCTCCGGCAAGAAGGTTCTTGCTCTTCCGGAGAAACTGTTTCTGAGGGATGCGGATGAAGACGAGCATGGAGGAGTGGAAGATATGACGAGGTTGGCTTACTTGAATGAACCAGGGGTGTTGTACAATCTTCGGAGAAGATATGCGCTGAATGATATTTATACATATACAGGGAGCATTTTAATAGCTGTTAATCCATTCACAAAGCTTCCTCATTTGTACGATATCCATATGATGGAGCAGTATAAGGGAGCTCCGTTTGGTGAGCTTAGTCCACATGTATTTGCTGTTGCTGATGCATCTTATAGAGCAATGATGAATGAAGGTCAAAGCCAATCTATCTTGGTCAGTGGTGAAAGTGGTGCAGGGAAAACAGAGACAACAAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGGCGTGCTGCTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCACTTTTAGAGGCATTTGGCAATGCAAGGACCATCAGGAATGATAATTCAAGGGAGTCAGGTTCAGAGGTGTTGAAGGATGTAGAAAAGTATAAGTTAGGACATCCGAGCCAATTCCACTATTTAAATCAAAGTAAAGTTTATGAATTAGATGGGGTAAGCAGTGCAGAAGAATACATGAAGACAAGGAGAGCAATGGATATTGTTGGCATAAGTCATGAGGATCAGGAAGCCATATTTTGCACCTTAGCTGCAATTTTACATCTGGGGAACGTTGAATTTTCTCCTGGGAAAGAGCATGACTCATCAGTAATAAAGGATGAAAAGTCAAGATTTCATTTGCAGATGGCTGCTAATCTATTCAAGTGTGATTTGAACCTACTGTTAGCAACATTATGTACCCGTTCAATACAAACCCGGGAAGGAAATATTGTCAAAGCTCTTGATTGTAATGCTGCTGTTGCTGGCCGGGATGCTTTGGCAAAAACTGTCTATGCTCGTTTGTTTGATTGGCTTGTTGATAAGATCAATTGGTCTGTTGGGCAAGATATCAATTCCCAGGTGCAAATTGGAGTTTTGGATATATATGGTTTCGAGTGCTTTAAGGATAATAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAAGAGGAATATAGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTATAGACAACCAAGATGTTTTGGATTTGATTGAAAAGAAACCCATTGGTATCATTGCTCTGTTAGATGAAGCTTGCATGTTTCCAAAATCGACGCACGAAACATTCTCAACCAAGTTGTTTCAGCACTTCTTGTCACACCCTAGGTTAGAAAAGGAGAAATTCTCAGAGACAGATTTTACTGTTTCTCATTATGCTGGAAAGGTCACTTACCATACAGACACCTTCTTAGACAAAAATCGTGATTATGTCGTTCTAGAACATTGTAATCTATTATCTTCTTCGAAATGCGCCTTTGTGTCGGGTCTTTTTCCTTTGTTACCAGAGGAATCTTCAAGGTCATCATACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTTCAAGCACTCATGGAAACACTTAACACAACAGAGCCTCATTACATTCGATGTGTCAAGCCAAATTCTTTGAATCTACCACAAAAGTTTGAGAATACAAGTGTCATACATCAATTACGATGTGGGGGTGTCCTTGAGGCTGTTCGGATAAGTCTGGCAGGTTACCCCACTCGAAGGACTTACTCAGAGTTTGTAGATCGCTTTGGATTAATAGCTCCTGAATTTATGGATGGAAGTTATGATGACAGAGCTGCAACTCAGAAAATATTGGAAAAGCTAAAGCTGGAAAATTTTCAGTTGGGTAGGACTAAAGTGTTTCTGAGGGCTGGTCAAATTGGCATTTTAGACTCCAGGCGTGCGGAAGTTTTGGACAATGCTGCAAAGTGTATTCAGCGTCGGCTGCTTACATTTATTGCACGCAGGGATTTCATCTCAATCCGAGCTGCTGCATTTTCTCTTCAAGCATGCTGCAGGGGATGCCTTGCCCGAAAGATATATGCTTCTAAACGGGAGACTGCAGCAGCTGTCTCCATTCAGAAATATATCCGTATGTGTTTGATGAGGCATGCTTACATGGCACTATATTCTTCTGCCATTCTCATACAATCCAATATTCGTGGTTTCACAACTCGCCAAAGATTCTTGCATAGAAAAGAACACAAGGCTGCTACTTTTATTCAGGCCTATTGGAGGATGTGCAAGGTTCGTTCTGCTTTCCAACAACATCAAGGTTCAATTGTGGCAATACAATGCCTTTGGCGGTGTAGACAAGCAAAGAGAGAGCTTCGTAGACTTAAACAAGAGGCTAATGAAGCTGGTGCCCTGCGTTTAGCTAAGAATAAACTTGAGAAACAATTGGAGGAGCTCACATGGCGTTTGCATCTTGAAAAAAAAATTAGGGTGTCTAATGAAGAAGCTAAGCAAGTTGAGATTTCCAAACTTCAGAAGATGTTAGAAGCTCGGAATGTTGAATTAGATGCGGCTAAATTGGCAACAATTAACGAGTCAAATAAGAATGCAATTTTGCAAAATCAGTTGCAATTGTCAGCAAAGGAAAAATCTGCTTTAGAAAGAGAGCTAGCTACCATGAATGAAGTGCGGAAGGAAAATGCTCTATTGAAGGGTTCTTTGGATGCCTTTGAAAAGAAGAGCACAGCTTTGGAGCTTGAACTTGTGAATGCTCAAAAAGACCATAATGAAACCATTCAGAAAATGAGGGATGTTGAACAGAAGTGTTCTCAACTTGCACAAAATGTGAAAAGTCTTGAAGAAAAGCTGTTGAGTTTAGAGGATGAAAATCATGTGCTTCGTCAGAAAGCCTTAAGTGTATCTCCTAATCGTAGTCGTCCTGGTTTTGCAAAGTCATCGTCAGAAATATACGCCAGTGCAATAGTTCCCCGCAGTGAGCGAAAGCCAATATTTGAATCACCTACACCCACAAAACTTATAGCCCCTTTTACACTTGGCTTGTCAGACTCTCGTCGATCTAAATTAACAGCAGAGAGGCACCAGGATAACTATGAATTCCTCTCTAGGTGTATCAAAGAGGATTTGGGGTTCAAAAATGGTAAACCTCTGGCAGCTAGTATTATATACAAATGTCTTCTTCATTGGCATGCCTTTGAATCTGAGCGCACAGCCATATTTGATTACATAATTGATGGAATTAATGATGTCCTAAAGGTTGGAGATGATGACATTGTCTTGCCATATTGGCTGTCCAATACCTCTGCACTTCTTTGCCTCTTGCAAAGGAACTTGCGTTCAAATGGTTTTTTAACTACTAGTGCGCAACGTCATGCTGGATCATCTGGCTTGACCAGCCGGATAGGGAACATTGTTTTTGAGAATAACCTGGAAGTCAATGTGGGAATGCGTGAATGTTGTACTTTCTCAAATGGTGAATATGTGAAGTCCGGTCTGGCAGAACTGGAGAAATGGATAGTTAATGCAAATGAGGAGGTAATACATCAGAAGAGGAAGAAATCATTGGAAGAAATTCGGCAGGATCTCTGTCCGGCATTAACTGTGAGGCAAATATATCGTATCAGTACTATGTACTGGGATGACAAGTATGGAACCCAAAGTGTGTCCAACGAGGTAGTTAATGAAATGAGGGAAATTGTGGGCAAGGACAATCAGAATTTGACCTCAAATTCATTCTTGTTGGATGATGATATGAGCATTCCTTTTTCTGCTGAAGACATAGATATGGCAATCCCTGCTATAAATACTGATGATATTGAACTCCCAGCATTTTTGTGTGAATATCCTTGTGCTCAGTTTCTTATTTTACATGAGAAGTAA 4017 0.4058 MPEPAMNLRKGSKVWVHDKDWAWLPAEVLEYAGKQVRLATSSGKKVLALPEKLFLRDADEDEHGGVEDMTRLAYLNEPGVLYNLRRRYALNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYKGAPFGELSPHVFAVADASYRAMMNEGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTIRNDNSRESGSEVLKDVEKYKLGHPSQFHYLNQSKVYELDGVSSAEEYMKTRRAMDIVGISHEDQEAIFCTLAAILHLGNVEFSPGKEHDSSVIKDEKSRFHLQMAANLFKCDLNLLLATLCTRSIQTREGNIVKALDCNAAVAGRDALAKTVYARLFDWLVDKINWSVGQDINSQVQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFQHFLSHPRLEKEKFSETDFTVSHYAGKVTYHTDTFLDKNRDYVVLEHCNLLSSSKCAFVSGLFPLLPEESSRSSYKFSSVASRFKQQLQALMETLNTTEPHYIRCVKPNSLNLPQKFENTSVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGSYDDRAATQKILEKLKLENFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQRRLLTFIARRDFISIRAAAFSLQACCRGCLARKIYASKRETAAAVSIQKYIRMCLMRHAYMALYSSAILIQSNIRGFTTRQRFLHRKEHKAATFIQAYWRMCKVRSAFQQHQGSIVAIQCLWRCRQAKRELRRLKQEANEAGALRLAKNKLEKQLEELTWRLHLEKKIRVSNEEAKQVEISKLQKMLEARNVELDAAKLATINESNKNAILQNQLQLSAKEKSALERELATMNEVRKENALLKGSLDAFEKKSTALELELVNAQKDHNETIQKMRDVEQKCSQLAQNVKSLEEKLLSLEDENHVLRQKALSVSPNRSRPGFAKSSSEIYASAIVPRSERKPIFESPTPTKLIAPFTLGLSDSRRSKLTAERHQDNYEFLSRCIKEDLGFKNGKPLAASIIYKCLLHWHAFESERTAIFDYIIDGINDVLKVGDDDIVLPYWLSNTSALLCLLQRNLRSNGFLTTSAQRHAGSSGLTSRIGNIVFENNLEVNVGMRECCTFSNGEYVKSGLAELEKWIVNANEEVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVNEMREIVGKDNQNLTSNSFLLDDDMSIPFSAEDIDMAIPAINTDDIELPAFLCEYPCAQFLILHEK 1338
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi697g00023 1338 Gene3D - 625 691 - -
Sebi697g00023 1338 Gene3D Myosin VI head, motor domain, U50 subdomain 269 402 - -
Sebi697g00023 1338 ProSiteProfiles Myosin motor domain profile. 64 690 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi697g00023 1338 ProSiteProfiles IQ motif profile. 764 793 IPR000048 GO:0005515
Sebi697g00023 1338 Coils Coil 909 1009 - -
Sebi697g00023 1338 Pfam IQ calmodulin-binding motif 766 784 IPR000048 GO:0005515
Sebi697g00023 1338 Pfam IQ calmodulin-binding motif 742 761 IPR000048 GO:0005515
Sebi697g00023 1338 Pfam IQ calmodulin-binding motif 790 810 IPR000048 GO:0005515
Sebi697g00023 1338 Pfam IQ calmodulin-binding motif 717 736 IPR000048 GO:0005515
Sebi697g00023 1338 ProSiteProfiles IQ motif profile. 716 745 IPR000048 GO:0005515
Sebi697g00023 1338 ProSiteProfiles IQ motif profile. 789 818 IPR000048 GO:0005515
Sebi697g00023 1338 ProSiteProfiles Dilute domain profile. 1120 1326 IPR002710 -
Sebi697g00023 1338 Coils Coil 825 869 - -
Sebi697g00023 1338 SMART DIL_2 1172 1263 IPR002710 -
Sebi697g00023 1338 Gene3D - 403 548 - -
Sebi697g00023 1338 Pfam Myosin head (motor domain) 66 215 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi697g00023 1338 Pfam Myosin head (motor domain) 225 678 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi697g00023 1338 PANTHER MYOSIN 764 1270 - -
Sebi697g00023 1338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 739 IPR027417 -
Sebi697g00023 1338 Gene3D Kinesin motor domain 549 624 IPR036961 -
Sebi697g00023 1338 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi697g00023 1338 PRINTS Myosin heavy chain signature 439 467 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi697g00023 1338 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi697g00023 1338 PRINTS Myosin heavy chain signature 386 414 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi697g00023 1338 Gene3D - 219 267 - -
Sebi697g00023 1338 ProSiteProfiles IQ motif profile. 812 841 IPR000048 GO:0005515
Sebi697g00023 1338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 743 839 IPR027417 -
Sebi697g00023 1338 Gene3D - 743 789 - -
Sebi697g00023 1338 Gene3D - 692 742 - -
Sebi697g00023 1338 Gene3D - 790 840 - -
Sebi697g00023 1338 ProSiteProfiles IQ motif profile. 741 767 IPR000048 GO:0005515
Sebi697g00023 1338 SMART iq_5 692 714 IPR000048 GO:0005515
Sebi697g00023 1338 SMART iq_5 763 785 IPR000048 GO:0005515
Sebi697g00023 1338 SMART iq_5 715 737 IPR000048 GO:0005515
Sebi697g00023 1338 SMART iq_5 740 762 IPR000048 GO:0005515
Sebi697g00023 1338 SMART iq_5 788 810 IPR000048 GO:0005515
Sebi697g00023 1338 SMART iq_5 811 833 IPR000048 GO:0005515
Sebi697g00023 1338 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Sebi697g00023 1338 CDD MYSc_Myo11 78 678 IPR036018 -
Sebi697g00023 1338 Gene3D Kinesin motor domain 35 218 IPR036961 -
Sebi697g00023 1338 SMART MYSc_2a 58 691 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi697g00023 Sebi-Chr697 266788 312178 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi697g00023 1196 1334 Myosins gene family AT4G33200 68.987 3.58e-61 229
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi697g00023 K10357 - gmx:100796413 2050.79