Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi697g00008 ATGGGTGGTGATGGTAAAGTTGAAGTTGTGAGTAGCAGGGGGTGCTCGAGGCTGGTTTCTTCTTCACTTTCTTCATCCAGAGGTCTGCAACCATTGGAGCCAATGTCTCCTGTTTCTTCCTCTGTGCAAGTGCGATCAAGTGCTCCCTTTTCTGGTCTTGTTATATGCGTTACTGGTTTATCTAAAGAAGCAAGGAATCAGGTCAAGGAGGCTACAGAGAGATTAGGTGGCCAATATAGCCCCAATTGCATCCTCAATTGCTGTCATGAAATCTTTAACATCCAGTACAGCTTTGGTGGACGCAAGTTTGAGCATGCGCTGAAGCATGGAGCAAAAGTTGGTCTCTTTGTTGTCACACTGGGTTGGTTTGTGGACAGCGTCAGGAAAAATGTAAGGTTGACCGAATCACATTATAGTGTGAAGAGTTATAGAGATAACAATATGCGCATGGATGATTTTAAACTGCTTCCTGCGTATACAAATTCTGAAAATTATTGTCTTCCTACAAGAATTCATGAAACCAAGCATGCTCATAGTGTTGAGGAATTTCAAAGATCCTCTGGGAGAGAGTCTAACAGAAATTTGGACTCAACTTTGTCTGGTTGCTCCATCTATGTTGATCCAGGCATTTCATCTGAATTGCGAAACAAGGTTGTTGAGACTGCCTCAAAAGAAGGTGCTAGTTTGGTGGAACAATGGTTTGTTGGCTGCAATCCACTCTGGATTCTCAAAACAGCTAAGGAGAAATATGCCCAAAGGCTTGTTCACATGTCTGTTGATTTGGCAAGGCAAGTTGGCTTGATGCTTGAAGACATTCATAATGGCATTTCCGGGAAGGAAATAAAGCAAAAAGTCCACGACGATCTTCAGGGCAGTGAACGTGAAACTTGTCAAACTCCAATACGTCCTATAACACCCAACAACCTTCTGGATTCTATCTGCTGGTCAATATCCGAGCCAACTTCATCTGCTTCCATTTACACAGACTCTTTCAGTGTTGAAGATCCTAGTGAAAATCATACTTCAATATTTTTTGATGCAAAAGGAGATGGCAAAGATTCAGAAGCTTCATTTTCAAACTCCACTCGCACTCTTACTGAAAGTGAGAAATCCGAGTTGATATTTAAAAACCATTTTCTTACCATCCTCTTCCCAATCGACCGATTTAATGAGATGGGTCCTTCTTCAAGAACATTTTTCAGCCATAACGGTTTTACATGTCTTCAGGTGTTGGATCATATACATGCATTTTATCAGGAGAACATGTCAAACCAGGAAATAGAAGCTGCAATTCATACTGATTCAAGACATGCTGATAGGCTTAGATCAGTGTACTCAAGTAAGGAAACAATAGAGCGTGGCTATGTGATGTTCAAACGAATTGAATTCTTGGGTAGTCGTACAAGTTTTGAAATGTTAAAGCGTGTACTGGGGACAACAACTCCAATGTGTATGAGCTATTACTTAGGGCGTAAGGGATGGCCAAAAATGTGA 1494 0.413 MGGDGKVEVVSSRGCSRLVSSSLSSSRGLQPLEPMSPVSSSVQVRSSAPFSGLVICVTGLSKEARNQVKEATERLGGQYSPNCILNCCHEIFNIQYSFGGRKFEHALKHGAKVGLFVVTLGWFVDSVRKNVRLTESHYSVKSYRDNNMRMDDFKLLPAYTNSENYCLPTRIHETKHAHSVEEFQRSSGRESNRNLDSTLSGCSIYVDPGISSELRNKVVETASKEGASLVEQWFVGCNPLWILKTAKEKYAQRLVHMSVDLARQVGLMLEDIHNGISGKEIKQKVHDDLQGSERETCQTPIRPITPNNLLDSICWSISEPTSSASIYTDSFSVEDPSENHTSIFFDAKGDGKDSEASFSNSTRTLTESEKSELIFKNHFLTILFPIDRFNEMGPSSRTFFSHNGFTCLQVLDHIHAFYQENMSNQEIEAAIHTDSRHADRLRSVYSSKETIERGYVMFKRIEFLGSRTSFEMLKRVLGTTTPMCMSYYLGRKGWPKM 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi697g00008 497 Gene3D BRCT domain 48 142 IPR036420 -
Sebi697g00008 497 SMART BRCT_7 47 130 IPR001357 -
Sebi697g00008 497 SUPERFAMILY BRCT domain 47 141 IPR036420 -
Sebi697g00008 497 ProSiteProfiles BRCT domain profile. 45 140 IPR001357 -
Sebi697g00008 497 Pfam twin BRCT domain 53 113 IPR001357 -
Sebi697g00008 497 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 239 281 - -
Sebi697g00008 497 CDD BRCT_TopBP1_rpt2_like 49 130 - -
Sebi697g00008 497 Pfam Family of unknown function (DUF6699) 399 475 IPR046522 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi697g00008 49 140 Core DNA Replication Machinery Family AT1G77320 35.870 9.64e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi697g00008 - - gmx:100815253 733.021