Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi696g00020 ATGGCTGAACAAATCCCTTACGGTGTTATTGTAAGCATCATCAATAGATTGGCTTCCTCTGCTTTCCATGAATTTGGACGAATTTATGGAGTTAGAGATGAGCTGGAAAGCCTTAACAAAACTCTTGAATCTATCAAAGTTGTGCTTTCAGATGCTGAGCAGAGACAAGACCAGGATCCCACTATTGGGCACTGGATAAGAAGGTTCAAAGAATTGCTACATGATGCTGATGACTTGCTCGATGAATTGGCAATTAAAGATATGCGGCTCAAAGTCAACGATCATAGCAAAGTGGTGAATAAGGTGCGTGGCTTATTATTATCCGAAAATCCACTTGCTTTTCGTGTTAAATTAGCTCGTAAGATTGAGAAGATTCGAAAGAAATTCAGTGATGTTGCAGAAGATATGTCTAAGTTGAAACTAAATCCAAGTTTGGTTGTTTTTAAACAATATGAGAGTTCCTGGAGGGAAACAAGTTCTTTTGTTTTGGAATCAAGCATAATTGGCAGGGAAGAAAACAAAATTGAGATTATTGAGTTGCTGATGCAAACAAATACCAATCAAAATGTTTCTTTGATTGCTATTGTTGGTATGGGGGGTTTGGGCAAGACAGCTCTTGCTCAGTTGGCGTACAATGATGCCCAAGTGCAGAAGCTTTTTGACAAATTCATGTGGGTGTGCATTTCTGAAGACTTTGAAGTAAAATCTGTTCTGAATAAAATATTAAAATCTTTAAAAAATGATGGAGTTGGTGACTTAGATTTAGACATCCTACAAAAGAAGCTTCGAGAAGAATTAAATGGGCAAAGGTATATGCTTGTCCTTGACGATGTGTGGAATGAAAATCAGCTAAAGTGGAATGATTTAAGAACTTATTTGATGTGTGGAGGTCAAGGTAGTAAGATATTAGTGACAACTCGTAGCACAATGGTCTCACAGATAATGGGTGTAAACAACCCGTATGTTTTGAAAGGTTTGAACAAAGAGCAATCGTGGACTTTGTTAAAGAAGTTGACATTTGGTGAAGATGCTAGCAAAATAAGCCCAAATCTAAAATCCATTGGTGAAAAAATTGCAAAAAAGTGCGGTGGTGTTCCACTAGCAATTAGAACAATGGGGGGCTTCTTACAAACTATAAATAAAGAAGAAGATCAATGGTTAAGTATTCTAAATGGTGATGTTTGGAGGTTGTGTGAAGAAAGACAGAGTATTATGCCAGTGCTAAGATTGAGTTACCAAAACTTGCCTCTTGGATTAAGACAATGTTTTGCTTATTGCTGTTTGTATCCTAAAGATTGGAAAATTGAAAAGGATGAATTGATTCGATTATGGATGGCTCAAGGCTACCTTGAAAGTTCGATTGAATCGCAATCCATGGAAGATGTGGGCAATCAATATGTCAAGATTTTGTTGATGAGGTCATTTTTTCAAGATGCATCATTGAGTAAAAATAATGATATAGTTTCCTTTAAAATGCATGATTTGATGTATGATCTTGCAAAGTCAGTAGCTGGAAATGATTGCTACCTTCATAGTGAGGGGAAAGGAATTATTGGAAGACCCATGCATGCCTCATTCATATCTAGTACCGTTTGTTCACTGGATTTGTTAGATGCAAGTAAACCACGAACTATTCTTTGGGCCAAAACCATAGTTGGAAGTGTTTTGGATGCCAAACCATCTATCATCAAGAACTTGAAGTCTGTGCGTGTTTTGGATTTGTCATATTCATCTATAACTAAACTGCCACAGTCTATTGATAAATGCAAGCATTTAAGATACTTGGACCTGTCCAATTGTAAAGAACTAATTAGTTTGCCCAAGTCTATTGGCAATCTTGTTAGCTTACAATCTTTGAAATTGTGTGGATGCCGGAAACTTGAATTTTGTACAGAAGTTATCACAAAGTTGATTAGTTTGAGACACCTTGACATTGAAGGTTGTAAAGCCTTTGAAGACATGATGCCTCTCGGATTAGGGCAATTGAGTTCGTTGCAGTCCTTATCAATTTTTGTTGTGGGGGATGATGAGAAGAAGAAATGTGGCAAACTAAATGAATTGAAGGAACTGAATAACATAAGAGGTCATCTGAGAATTAGTCATCTAGGTTTAGTAAAAGATGTGGCATTGGAGTCTCAAGAAGCAAATCTGAAAGCAAAGAAACACATTCAACTCCTGGAGTTGAATTGGGGAAAAAGCAAATATGAATTGGTAGAAGAAAGCAAAAACAATGAGATCCACTTGCAATTATTGGATAACCTTTGCCCTAATCAGAATTTGAGAAAATTGAGAGTAAGTGGGTATCCAGGAGTGAGGTTTTCAAGTTGGCTTCCTTCACTCACTAATATTGTTCAAATCTACTTCTACCGCTTTTCCAATTGCCAACATCTCCCACCATTGGAAAGACTCCCATGGCTGAAGAAGCTCCACATTAGTGAAATGAATGAACTGAAGTACATGCATTATTATGATATTTCTCACGTTTTCTTCCCGTCATTGGAGAGACTCATCCTCTTTGACTGCAAGAATCTTATGGGATGGCAAAAGTTGGCAAATGATGTTGACAACCACTGTTCACTGCCTCCTTTTCCTCGTCTTTCATATTTGGAAATATGGGATTGTCCAAACTTGACTTGCATGCCTACTTATCCATACCTTGTTGAGTTGCGGTTAATTTCTTGTAATGTGAAGCCATTGATTGAAACATGTTTGGTTCAGCTTCATTCTTCCTCCTTCAATCCTCTTTCTGGCCTCAAACAGTTGTATGTTACAGAAATAGACGTAGAAGCAATGCCAAAGAAGTGGATGGAAAATCTCACATCTCTTGAGCATCTCTCTCTTTCAGGATTACTTATTATTGTGCCAATGTTACAACACTTGCGACATCTTTCTGCTGAACTTCAGGATCTGAGAATTTGTCAAGTTGACAAGCTTGATCTGTGGAAAGATGAAAAACCTCATGGGCTCCAATCTCTGCAGAAAATATCCATAGAATTTTGTGACAACCTGAAGGCTTTACCGCAGCAAATCTATGACCTCCAATCACTTAGGCATATTAAGATTCTTCATTGCCATAATTTAGAGTCATTGCCTGAAGGCATGCAATGCCTTACCAATTTACAGACTCTTCGTATCAGCCACTGTCACCTCCTACGAAAGAGATGCCAAATTGGAGAAGATTGGCCAAACATTGTTCACATCCCAAACATAATCATAGATTGA 3222 0.3768 MAEQIPYGVIVSIINRLASSAFHEFGRIYGVRDELESLNKTLESIKVVLSDAEQRQDQDPTIGHWIRRFKELLHDADDLLDELAIKDMRLKVNDHSKVVNKVRGLLLSENPLAFRVKLARKIEKIRKKFSDVAEDMSKLKLNPSLVVFKQYESSWRETSSFVLESSIIGREENKIEIIELLMQTNTNQNVSLIAIVGMGGLGKTALAQLAYNDAQVQKLFDKFMWVCISEDFEVKSVLNKILKSLKNDGVGDLDLDILQKKLREELNGQRYMLVLDDVWNENQLKWNDLRTYLMCGGQGSKILVTTRSTMVSQIMGVNNPYVLKGLNKEQSWTLLKKLTFGEDASKISPNLKSIGEKIAKKCGGVPLAIRTMGGFLQTINKEEDQWLSILNGDVWRLCEERQSIMPVLRLSYQNLPLGLRQCFAYCCLYPKDWKIEKDELIRLWMAQGYLESSIESQSMEDVGNQYVKILLMRSFFQDASLSKNNDIVSFKMHDLMYDLAKSVAGNDCYLHSEGKGIIGRPMHASFISSTVCSLDLLDASKPRTILWAKTIVGSVLDAKPSIIKNLKSVRVLDLSYSSITKLPQSIDKCKHLRYLDLSNCKELISLPKSIGNLVSLQSLKLCGCRKLEFCTEVITKLISLRHLDIEGCKAFEDMMPLGLGQLSSLQSLSIFVVGDDEKKKCGKLNELKELNNIRGHLRISHLGLVKDVALESQEANLKAKKHIQLLELNWGKSKYELVEESKNNEIHLQLLDNLCPNQNLRKLRVSGYPGVRFSSWLPSLTNIVQIYFYRFSNCQHLPPLERLPWLKKLHISEMNELKYMHYYDISHVFFPSLERLILFDCKNLMGWQKLANDVDNHCSLPPFPRLSYLEIWDCPNLTCMPTYPYLVELRLISCNVKPLIETCLVQLHSSSFNPLSGLKQLYVTEIDVEAMPKKWMENLTSLEHLSLSGLLIIVPMLQHLRHLSAELQDLRICQVDKLDLWKDEKPHGLQSLQKISIEFCDNLKALPQQIYDLQSLRHIKILHCHNLESLPEGMQCLTNLQTLRISHCHLLRKRCQIGEDWPNIVHIPNIIID 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi696g00020 1073 Gene3D Ribonuclease Inhibitor 884 1063 IPR032675 -
Sebi696g00020 1073 Gene3D Ribonuclease Inhibitor 680 883 IPR032675 -
Sebi696g00020 1073 Pfam Leucine rich repeat 559 600 IPR001611 GO:0005515
Sebi696g00020 1073 PANTHER DISEASE RESISTANCE PROTEIN RP 35 878 IPR044974 GO:0006952
Sebi696g00020 1073 Pfam NB-ARC domain 171 413 IPR002182 GO:0043531
Sebi696g00020 1073 Pfam Rx N-terminal domain 10 96 IPR041118 -
Sebi696g00020 1073 PRINTS Disease resistance protein signature 265 279 - -
Sebi696g00020 1073 PRINTS Disease resistance protein signature 362 376 - -
Sebi696g00020 1073 PRINTS Disease resistance protein signature 192 207 - -
Sebi696g00020 1073 PRINTS Disease resistance protein signature 587 603 - -
Sebi696g00020 1073 SUPERFAMILY L domain-like 491 896 - -
Sebi696g00020 1073 Gene3D Ribonuclease Inhibitor 548 672 IPR032675 -
Sebi696g00020 1073 Gene3D - 412 503 IPR036388 -
Sebi696g00020 1073 SUPERFAMILY RNI-like 830 1052 - -
Sebi696g00020 1073 FunFam Probable disease resistance protein At1g61300 149 320 - -
Sebi696g00020 1073 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 426 IPR027417 -
Sebi696g00020 1073 Coils Coil 35 55 - -
Sebi696g00020 1073 FunFam Probable disease resistance protein At1g63360 412 502 - -
Sebi696g00020 1073 Gene3D - 10 138 - -
Sebi696g00020 1073 Gene3D - 152 319 IPR027417 -
Sebi696g00020 1073 Gene3D - 325 411 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi696g00020 Sebi-Chr696 473720 476941 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi696g00020 189 373 WRKY Transcription Factor Family AT5G45050 26.984 1.63e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi696g00020 - - mtr:25487253 1687.93