Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi696g00019 ATGGCTGAACTAATCCCGTACAGTGTTATTGAAAACATCATCAACACGTTGGCCTCGTCGGTTTGGCAGGAATTCGGACGGATTTATGGAGCCAGCGATGAGCTCGAAAACCTTAAGAGAACTCTTGAATCCATCAAAGTTTCGCTTTCAGATGCTGAGCAGAGAAAAGACCAGGATCCTAATTTTGAGCACTGGATAAGAAGGTTCAAAGAGGTGCTACATGAAGCTGATGACTTACTCGATGGCTTGGCAATTGAAGATAAGCGCCGCAAAGTCAACGGTCAAAGAAAATGGGTGAGTAAGTTCCGTGATTTCTTTTCATTCGGAAAATTAGCCGGTGAAGTTGAGAAGATTCAAAAGAAATTAAGTAATGTTGTCAATGATATGTCTAAGTTGAAATTGAACCCAAGTTTGGTGATTCTTAAACAAAATGAGAATGCATGGAGGGAGACAAGTTCTTTTGTTTTACAGTCTGATGTAGTTGGCAGGGAAGAAAGCAGAAAAGAGATTATTGAATTGTTGGAGCAAACTAACACAGACCAAAATGTTTCTTTCATTGCTATTGTTGGTATGGGGGGTTTGGGCAAGACAGCTCTTGCTCAGTTGGTGTACAACGATGTTCAAGAACATAAGCTTTTTGACAAATGGATGTGGGTGTGTGTTTCTGAAGACTTTGAAGTAAAATATATTCTGAATAAAATGTTACAATCATTGAAAAATCATGATTTTGGTGACTTAGAATTAGACATCTTACAAAAGAAGCTACGAGAAGAATTAAATGGGCAAAGATATATGCTTGTTCTTGATGATGTGTGGAATGAAAGTCAACTAAAGTGGAATGCTTTAAGAACTCATTTGATGTGTGGAGGTGAAGGTAGCAAGATATTAGTGACTACTCGCAGTACAATGGTCTCACACATAATGAACATAAACAACCCATATGTTTTGAAAGGTTTGACCAAAGAGCAATCATGGACCTTGTTAAAGAAATTGACAATTGGTGAAGATGCGAGCAGAATGAGCCCAAATCTTGAATCTATTGGTGAAAGAATTGCAGAAAAGTGTGGTGGAGTTCCACTAGCAATTAGAACAATGGGAGGCTTCTTACAAACTATAAATAAAGAAGAAGATCAATGGTTAAGTATTTTAAATGGTGATGTTTGGAGAATGTGTGAAGAAAGACAGAGTATTATGCCAGTGCTAAAATTGAGTTACCAAAACTTGCCACTGGGATTAAGACAATGTTTTGGTTATTGTTATTTGTATCCTAAAGATTGGGAAATTAAAAGGGATGAATTGATTCAATTATGGATGGCTCAAGGCTACCTTGAAATTTCAAATGAAACACAATCCATGGAAGATGTGGGCAATCAATATGTCAAGATCTTGTTAATGAGGTCATTTTTCCAAGATGTATCATTGAATGAATACAATGATATAGCTTCCTTCAAAATGCATGATTTGATCCATGATCTTGCAAAGTCAGTAGCTGGAAATGATTGCTACCTGGATATTGAGGGGAAAAGAATTGTTGGAAGACCCATGCATGTCTCGTTTGTATCTAGCACCGTTCTTTCATTGGATTCATTAGATGCAAGGAAACTGCGAAGCATTCTATCATCACGAAGACTGGCTAAATCCAATGTTGGAAATGTTTCTGATGTCAAACCATCGATCATGAAGAAGTTGAAGCACCTGCGTGTTTTGGATTTATCATATTCTTCTCTAACTGAGCTGCCAGAGACCATTGATCACTGCAAGCATTTAAGATATCTGGACCTGTCCTATTGTTTAAGTCTAGTTAGTTTGCCCAATTCTATTAGCAATCTGGTTAGCTTGCAAACTTTGAAATTGAGTGGATGCATGCAACTTCTATTTTGTACAGAAGTTATTACAAAGATGTTCTGTTTGAGACACCTTAACATTGAAGATTGTAAAGCCTTCCAAGACATGCCAGTCGGATTAGGGCAATTAACTCTGTTGCAGTCCTTATCAATTTTTGTGGTGGGTGATGATCAGAAGAGGAAATGTGGCAAACTAAATGAGTTGAGGGAGCTGAATAACATAAAAGGTAGTTTGGGAATTAGTAATCTGCGTTTAGTAAAAGAGGTGGAGTTGGAGTCACAAGAAGTAAACATGAAAGCAAAGAAATCCATTCAATTTCTAGAGTTGTGTTGGGGAGAAGACAAATATGATCAAGCAAAGAAAAGCGTAAACAGTGACAGCTTACAGTTATTGGATAACCTTTGTCCTCATCAGAATCTGAGAAAATTGATTGTGAGTGGGTATCCAGGAGTAAGGTTTTCAAGTTGGCTTCCTTCACTCACTAATGTTGCTAAAATCAACCTCTACCGCTTTTCTAGTTGCCATTATCTCCCACCATTGGAAAGACTCCCACAGTTGAAGAGGCTCAGGATTCGTAATTTTGATAAACTAGAGTATATTTATTATGAAGAGATTTCTCATGTGTTCTTCCCGTCCTTGGAGAAACTTGTCCTCACAGAATGTGAGAACCTGAGGGGATGGCAAAGGTTGGAAAATGATGTTGATAACCATCATTCTCTGCCTCCTTTTCCTCATCTTTCACATTTGGAAATTTGGGAATGTCCGAATTTGACTTGCATGCCTCCTTATCCTCACCTTGTTGACTTGAGCTTATATTCTTGTAGTGTGAAGTCACTGACTGAAACATGTTCGGTTCGACTTCAGTCTTCCTCCTTCTATCCTCTTTCTAGCCTCAAGCACTTGGATATTGGTAAAGAAATAGACATAAAAGCAATGCCAGAGAAGTGGATGCAAAATCTGACATCTTTGGAATGTGTAGGACTTTCGGGATTACCAATTATTGCACCTATGTTACTACACTTACAACATCTTCCTGCTGAACTTAAGGAATTGAGAATATTTGGAGTCAACAAGCTTGATCTTTGGAAAGATGAGGATCATGTTGGCACACAATGCCACGTTCCTCTCTGCCTTCATTCTTTGCAGAAATTAACCATAACATCTTGTTACAATATGAAGGCTTTACCAGAGCAAATCCATGACCTCCAATCACTTAGGCACATTGAGATTGTCCATTGCAATAATTTAGAATCATTGCCTGAAGGCATGCGTTTCCTTACCAATTTACAGACTCTACATATTGACAATTGTCCCTTTCTACATGATAGATGCCAATCCAAAATTGGAAAAGATTGGCCCAAGATTGCTCACATCCCAAACATAACCGTGAATAAAACCTCCCAAAGGTAA 3255 0.3816 MAELIPYSVIENIINTLASSVWQEFGRIYGASDELENLKRTLESIKVSLSDAEQRKDQDPNFEHWIRRFKEVLHEADDLLDGLAIEDKRRKVNGQRKWVSKFRDFFSFGKLAGEVEKIQKKLSNVVNDMSKLKLNPSLVILKQNENAWRETSSFVLQSDVVGREESRKEIIELLEQTNTDQNVSFIAIVGMGGLGKTALAQLVYNDVQEHKLFDKWMWVCVSEDFEVKYILNKMLQSLKNHDFGDLELDILQKKLREELNGQRYMLVLDDVWNESQLKWNALRTHLMCGGEGSKILVTTRSTMVSHIMNINNPYVLKGLTKEQSWTLLKKLTIGEDASRMSPNLESIGERIAEKCGGVPLAIRTMGGFLQTINKEEDQWLSILNGDVWRMCEERQSIMPVLKLSYQNLPLGLRQCFGYCYLYPKDWEIKRDELIQLWMAQGYLEISNETQSMEDVGNQYVKILLMRSFFQDVSLNEYNDIASFKMHDLIHDLAKSVAGNDCYLDIEGKRIVGRPMHVSFVSSTVLSLDSLDARKLRSILSSRRLAKSNVGNVSDVKPSIMKKLKHLRVLDLSYSSLTELPETIDHCKHLRYLDLSYCLSLVSLPNSISNLVSLQTLKLSGCMQLLFCTEVITKMFCLRHLNIEDCKAFQDMPVGLGQLTLLQSLSIFVVGDDQKRKCGKLNELRELNNIKGSLGISNLRLVKEVELESQEVNMKAKKSIQFLELCWGEDKYDQAKKSVNSDSLQLLDNLCPHQNLRKLIVSGYPGVRFSSWLPSLTNVAKINLYRFSSCHYLPPLERLPQLKRLRIRNFDKLEYIYYEEISHVFFPSLEKLVLTECENLRGWQRLENDVDNHHSLPPFPHLSHLEIWECPNLTCMPPYPHLVDLSLYSCSVKSLTETCSVRLQSSSFYPLSSLKHLDIGKEIDIKAMPEKWMQNLTSLECVGLSGLPIIAPMLLHLQHLPAELKELRIFGVNKLDLWKDEDHVGTQCHVPLCLHSLQKLTITSCYNMKALPEQIHDLQSLRHIEIVHCNNLESLPEGMRFLTNLQTLHIDNCPFLHDRCQSKIGKDWPKIAHIPNITVNKTSQR 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi696g00019 1084 Pfam Rx N-terminal domain 9 97 IPR041118 -
Sebi696g00019 1084 Pfam NB-ARC domain 164 407 IPR002182 GO:0043531
Sebi696g00019 1084 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 419 IPR027417 -
Sebi696g00019 1084 Gene3D - 9 130 - -
Sebi696g00019 1084 FunFam Probable disease resistance protein At1g61300 142 313 - -
Sebi696g00019 1084 FunFam Probable disease resistance protein At1g63360 405 495 - -
Sebi696g00019 1084 Pfam Leucine rich repeat 551 597 IPR001611 GO:0005515
Sebi696g00019 1084 Gene3D Ribonuclease Inhibitor 879 1066 IPR032675 -
Sebi696g00019 1084 Gene3D Ribonuclease Inhibitor 675 878 IPR032675 -
Sebi696g00019 1084 Gene3D - 405 496 IPR036388 -
Sebi696g00019 1084 Coils Coil 115 135 - -
Sebi696g00019 1084 Gene3D - 142 314 IPR027417 -
Sebi696g00019 1084 Coils Coil 35 55 - -
Sebi696g00019 1084 CDD RX-CC_like 7 125 IPR038005 -
Sebi696g00019 1084 PANTHER DISEASE RESISTANCE PROTEIN RP 35 875 IPR044974 GO:0006952
Sebi696g00019 1084 Gene3D - 318 404 IPR042197 -
Sebi696g00019 1084 SUPERFAMILY L domain-like 469 1071 - -
Sebi696g00019 1084 Gene3D Ribonuclease Inhibitor 513 669 IPR032675 -
Sebi696g00019 1084 PRINTS Disease resistance protein signature 355 369 - -
Sebi696g00019 1084 PRINTS Disease resistance protein signature 185 200 - -
Sebi696g00019 1084 PRINTS Disease resistance protein signature 561 577 - -
Sebi696g00019 1084 PRINTS Disease resistance protein signature 258 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi696g00019 Sebi-Chr696 460611 463865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi696g00019 182 366 WRKY Transcription Factor Family AT5G45050 27.368 6.99e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi696g00019 - - mtr:25487253 1441.4