Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi696g00017 ATGCTCCCCACCCTCAATCTCGCCGGCGACGTCGTTATCGCCGAGCATCTCTCTCCGCGCCTCGGGAACCTCGGCCATGGAGACTTGGTTCTGGTGCGGTCCCCTTTGAACCCTAATCGGAGTTTGACCAAGCGCATCGTCGCCATGGAAGGAGACACGGTCACTTACTTTGACCCTTTGCACGCTGATGCTGCTCAAGTTGCAGTGGTGCCAAAGGGGCATGTTTGGATTCAAGGGGATAACATCTATGCCTCCCATGATTCACGACATTTTGGACCTGTTCCGTATGGTCTTATACAAGGAAAAGTGTTTTTCCGGGTTTGGCCACCTGATAGCTTTGGACTGCTTGGTTAA 354 0.5311 MLPTLNLAGDVVIAEHLSPRLGNLGHGDLVLVRSPLNPNRSLTKRIVAMEGDTVTYFDPLHADAAQVAVVPKGHVWIQGDNIYASHDSRHFGPVPYGLIQGKVFFRVWPPDSFGLLG 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi696g00017 117 SUPERFAMILY LexA/Signal peptidase 1 116 IPR036286 -
Sebi696g00017 117 FunFam Inner membrane protease subunit 1 1 115 - -
Sebi696g00017 117 Pfam Signal peptidase, peptidase S26 66 108 IPR019533 GO:0004252|GO:0006465
Sebi696g00017 117 Pfam Signal peptidase, peptidase S26 1 57 IPR019533 GO:0004252|GO:0006465
Sebi696g00017 117 CDD S26_SPase_I 1 103 IPR019533 GO:0004252|GO:0006465
Sebi696g00017 117 Gene3D Umud Fragment, subunit A 1 114 - -
Sebi696g00017 117 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 116 - -
Sebi696g00017 117 PRINTS Bacterial leader peptidase 1 (S26A) family signature 42 54 IPR000223 GO:0006508|GO:0008236|GO:0016020
Sebi696g00017 117 PRINTS Bacterial leader peptidase 1 (S26A) family signature 70 89 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi696g00017 Sebi-Chr696 412305 414279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi696g00017 1 117 MADS-box Gene Family AT1G29960 50.847 2.33e-40 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi696g00017 K09647 - gmx:100527597 221.476