Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi696g00005 ATGAAGAATTCCCTGATAATAGCCTTTTCCATAACCATATGCTTCATAGCTTTTGTCATATCCAAGATTTTTATCTCGGTCCTCCTCTACAAAAGATGGAGAAGAAAGCAATTGATTTATGAAGGTTTTACAGGAGGGAAGATGGTGATATTTAGGTCTTCAGTGCTTAAATCTCTCACATCTGATATGGTCTTAAAGAAGACACAGAAACTGAACAACAAGGACATTATTGGATCAGGAGGTTATGGTGTAGTTTATGAACTAAAACTAGATGACTCCACAGCCTTTGCTGTGAAAAGGCTAAACCGTGGAACTGCAGAGAGAGATAAAGGTTTTGAGAGAGAGTTGGAAGCAATGGCAGACATAAAACACCGCAACATTGTGACTCTTCATGGATATTATAGTGCACCACACTACAATCTTCTCATATATGAGCTAATGCCTAATGGAAGTTTGGATTGCGTTTTGCATGGGAGATCAATGGACAAGAAGGTTTTGGATTGGCCAACCAGATACAGAATAGCTGTAGGTGCAGCTAGAGGAATATCATATCTTCACCATGATTGTATCCCTCACATTATCCACAGAGACATTAAATCAAGTAATATATTGCTGGATCAAAACATGGAGGCTCGAGTTTCTGATTTTGGATTAGCCACCTTGATGGAACCAAACAAAACTCATGTTTCAACAATTGTGGCTGGAACTTTTGGATATTTGGCACCAGAATATTTTGATACAGGAAGAGCAACAGTCAAAGGGGATGTTTACAGCTTTGGAGTTGTGTTACTGGAGCTTTTAACAGGGAAAAAACCCTGTGATGAAGCATTTATGGAAGAGGGAACCAAGCTTGTCACATGGGTGAAGGCTGTTGTTCGAGAGAAGAAAGAGGAGCTAGTTCTTGATAGTAGCTTAGGGTCTTGTCCAATGCAAGAGGTCAACAAGGTGTTCAACATTGCAATGATGTGTCTTGAACCAGATCCCTTGAAGAGGCCAACCATGGCTGAGGTTGTCAACTTGCTTGAGCAAACAGAATCAAACCAACTTGTTACAGCATCCTGA 1062 0.403 MKNSLIIAFSITICFIAFVISKIFISVLLYKRWRRKQLIYEGFTGGKMVIFRSSVLKSLTSDMVLKKTQKLNNKDIIGSGGYGVVYELKLDDSTAFAVKRLNRGTAERDKGFERELEAMADIKHRNIVTLHGYYSAPHYNLLIYELMPNGSLDCVLHGRSMDKKVLDWPTRYRIAVGAARGISYLHHDCIPHIIHRDIKSSNILLDQNMEARVSDFGLATLMEPNKTHVSTIVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPCDEAFMEEGTKLVTWVKAVVREKKEELVLDSSLGSCPMQEVNKVFNIAMMCLEPDPLKRPTMAEVVNLLEQTESNQLVTAS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi696g00005 353 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 147 352 - -
Sebi696g00005 353 FunFam Receptor-like serine/threonine-protein kinase 42 146 - -
Sebi696g00005 353 Gene3D Phosphorylase Kinase; domain 1 47 146 - -
Sebi696g00005 353 ProSiteProfiles Protein kinase domain profile. 71 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi696g00005 353 SUPERFAMILY Protein kinase-like (PK-like) 51 343 IPR011009 -
Sebi696g00005 353 SMART serkin_6 71 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi696g00005 353 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 6 345 - -
Sebi696g00005 353 Gene3D Transferase(Phosphotransferase) domain 1 147 352 - -
Sebi696g00005 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Sebi696g00005 353 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524
Sebi696g00005 353 Pfam Protein kinase domain 73 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi696g00005 Sebi-Chr696 201262 203587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi696g00005 5 343 Receptor kinase-like Gene Family AT2G35620 46.784 3.96e-103 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Sebi696g00005 Pkinase 4.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi696g00005 - - ahf:112703495 601.282