Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi694g00030 ATGCTAAACCAATCTTCTCATAGAAAATCTTTCATTGATTCTTCAATCAGTTCAGTAAGGCAATATGGGTTTCAGGGCATAGACCTATATGCAGTCAAGCCAAGGCAGGGTAAGGACCTTATTGCCAATTTTGGAACCCTTTTGAAGGAGTGGAGAGCTGCAATAACTTCTGAGGCAAGAAACTCTAACAAGCCAGAGTTAGCATTGGTGATGGCAGGTTACTTCCTCAAAGCTTCAGACTCCTTCAGTTACCCCTTCGAATCAATGCATGAACTTGGATTGGGAGACAATGGCGTGGGAAAACCAACATCAGGACCTGCCATTACAAAGGACGGTTCCATGGCTTATAAGCTGATAAAGAGTTACATCAGAAGCTTTGGAGGGGGTGTTGTTTCACATTATAATGCTACTTTTGTGGTGAATCACTTCACAGTTGCATCCACCACTTGGGTTAATTTTGATGATGTGGAGGTAATCAGGGCTAAAGTTTCTTATGCAAAGAAAAATGGCCTACTTGGTTACAGCATGTTCCAATTGAGTAATGATGAAAATTGGGTCCTTTCAAGGGCAGCTCAAGAAGTAGATGAAGATCATCATAAGAGGAGGTTGCTGATAATTGTTCTGCTTACTACTCTGACTTTTGCACTACTATTGGGAATATTATTTTGCTACTACCACCGAGGAACTGTGGCCACTATTACAAGAATATTGTATAAACTAAGGAGATATTTATCAGCAGCTGAAGAAAAAGATCTTGATGGAAATCATTCTGATCTGATAGCATTCAGTTATCTCACAATTAAAGTGGCAACAGATAACTTCTCAAAAGATAATAAGCTTGGAGAGGGGGGATTTGGCACAGTATACAAGGGCAAATTACGGAAGGGACAGGAAATAGCTGTGAAAAGACTCTCAGAAACTTCAAATCAAGGCCTTGAAGAGTTCAAAAATGAGATCACACTTACAGCAAGACTACAACATGTGAATTTAGTTAGACTTTTGGGTTACTGCACAAAAAAGGATGAGAAGATTCTGATCTATGAATACCTGCCAAACAAAAGCTTAGATCATTTCCTTTTTGATCCAAGGAAATCAATTCTTTTAGACTGGAGCAAGCGTGTCAATATCATTGAAGGGGTTACTCAAGGCCTTGTTTATCTCCAAGAGTATTCAAATTTTACTATAGTCCACCGAGATCTTAAAGCTAGTAATGTTTTGTTAGATCATGAGATGAATCCCAAGATATCAGATTTTGGCATGGCTAGAATTTTCAGGAAATATGACCTTGAAGCAAACACAAACAGGATCGTGGGAACATATGGGTATGTACCTCCTGAGTATGTGAGGAAAGGCATATACTCAACCAAGTACGATGTTTATAGTTTTGGAGTTCTTCTCTTGCAAATCATAAGTGGAAAAAGGACTTCATGTTATTACGGTACACATGAAAATATGAACCTTTGGAATATAGGTGAAGAGTTTATTGATCCATCATTGGATGATACAACATCACCTTGTAAAATCATGAGATGCATGCAGGTGGGTCTGTTGTGCGTTCAAGATAACTCTGCAGATAGACCTTCCATGTTAGAAGTTGATTCACTGCTGAAGAATGAAGCTGCACCTATTGGTACTCCCAAAATGCCCGCTTTTTCAATTAAAAAACATGAAGATGAGGAAGAAAGAGCCCACTATGGGATCAAATTTTCTTCAAACAATGATGTTACAATTTCTGAACTGGCACCAAGATGA 1752 0.3881 MLNQSSHRKSFIDSSISSVRQYGFQGIDLYAVKPRQGKDLIANFGTLLKEWRAAITSEARNSNKPELALVMAGYFLKASDSFSYPFESMHELGLGDNGVGKPTSGPAITKDGSMAYKLIKSYIRSFGGGVVSHYNATFVVNHFTVASTTWVNFDDVEVIRAKVSYAKKNGLLGYSMFQLSNDENWVLSRAAQEVDEDHHKRRLLIIVLLTTLTFALLLGILFCYYHRGTVATITRILYKLRRYLSAAEEKDLDGNHSDLIAFSYLTIKVATDNFSKDNKLGEGGFGTVYKGKLRKGQEIAVKRLSETSNQGLEEFKNEITLTARLQHVNLVRLLGYCTKKDEKILIYEYLPNKSLDHFLFDPRKSILLDWSKRVNIIEGVTQGLVYLQEYSNFTIVHRDLKASNVLLDHEMNPKISDFGMARIFRKYDLEANTNRIVGTYGYVPPEYVRKGIYSTKYDVYSFGVLLLQIISGKRTSCYYGTHENMNLWNIGEEFIDPSLDDTTSPCKIMRCMQVGLLCVQDNSADRPSMLEVDSLLKNEAAPIGTPKMPAFSIKKHEDEEERAHYGIKFSSNNDVTISELAPR 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi694g00030 583 Gene3D Phosphorylase Kinase; domain 1 237 349 - -
Sebi694g00030 583 SUPERFAMILY Protein kinase-like (PK-like) 257 534 IPR011009 -
Sebi694g00030 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Sebi694g00030 583 ProSiteProfiles Protein kinase domain profile. 274 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi694g00030 583 CDD STKc_IRAK 280 538 - -
Sebi694g00030 583 SMART serkin_6 274 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi694g00030 583 SUPERFAMILY (Trans)glycosidases 1 183 IPR017853 -
Sebi694g00030 583 Gene3D Glycosidases 1 93 - -
Sebi694g00030 583 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 168 580 - -
Sebi694g00030 583 FunFam Uncharacterized protein 249 349 - -
Sebi694g00030 583 Gene3D Glycosidases 94 205 - -
Sebi694g00030 583 Pfam Protein tyrosine and serine/threonine kinase 276 534 IPR001245 GO:0004672|GO:0006468
Sebi694g00030 583 Pfam Glycosyl hydrolases family 18 2 79 IPR001223 GO:0005975
Sebi694g00030 583 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 198 IPR001223 GO:0005975
Sebi694g00030 583 FunFam Lectin-domain containing receptor kinase A4.3 350 555 - -
Sebi694g00030 583 ProSitePatterns Protein kinases ATP-binding region signature. 280 302 IPR017441 GO:0005524
Sebi694g00030 583 Gene3D Transferase(Phosphotransferase) domain 1 350 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi694g00030 Sebi-Chr694 350497 353836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi694g00030 236 558 Receptor kinase-like Gene Family AT4G11480 48.949 1.44e-111 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi694g00030 PK_Tyr_Ser-Thr 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi694g00030 - - aprc:113847882 806.208