Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi694g00029 ATGCCATCCCACAAGACATTCAGGATCAAGAAGAAGCTGGCGAAGAAGATGAGGCAGAACAGACCCATCCCTTACTGGATCCGTATGAGGACCGACAACACCATCAGGTTAGGTATAATGCTAAGCGCAGGCACTGGCGCCGCACCAAACTTGGATTTTAAGGTGGATGAAGAACAACCTCCACCATTCTAG 192 0.4948 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRLGIMLSAGTGAAPNLDFKVDEEQPPPF 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi694g00029 63 PANTHER RIBOSOMAL PROTEIN L39E 1 36 - -
Sebi694g00029 63 FunFam 60S ribosomal protein-like L39 1 39 - -
Sebi694g00029 63 Pfam Ribosomal L39 protein 9 36 IPR000077 GO:0003735|GO:0005840|GO:0006412
Sebi694g00029 63 SUPERFAMILY Ribosomal protein L39e 3 37 IPR023626 -
Sebi694g00029 63 Gene3D Ribosomal protein L39e 1 38 IPR023626 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi694g00029 Sebi-Chr694 329363 329730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi694g00029 1 36 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 86.111 1.19e-17 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi694g00029 K02924 - gmx:100807176 79.3369