Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi694g00028 ATGGCCTCTGACATATCATTTGAAGACCTCAAGAACGAGAATCTGGATCTTGAAAACATTCCTGTTGAGGAAGTTTTTAAGCAGCTAAAATGTACCAGAGAGGGTCTAACAACAACTGAGGGAGAGAACAGGCTCCAAATTTTTGGGCCTAATAAGCTAGAGGAGAAAACTGAGAGCAAGTTCCTTAAATTCTTGGGTTTTATGTGGAATCCACTATCATGGGTTATGGAGGCTGCTGCTGTCATGGCCATTGCATTGGCCAATGGAGGGGGCAAGCCACCGGATTGGCAAGATTTGTTGGTGTTGAGGGATGGAAAATGGAGTGAACAAGAGGCAGCAATTTTGGTTCCAGGAGATTTGATCAGCATCAAGTTGGGAGATATTGTCCCAGCTGATGCACGTCTTTTGGAGGGAGATCCCCTTAAGATTGACCAATCTGCCCTTACTGGTGAGTCCTTGCCAGTCACTAAACACCCTGGTCAAGAGGTCTTCTCTGGTTCCACTTGCAAACAAGGTGAGTTAGAGGCTGTTGTCATTGCCACTGGTGTCCACACCTTCTTTGGTAAGGCTGCACATCTTGTGGACAGCACCAACAATGTTGGTCACTTCCAAATGGTGTTGACATCCATTGGAAACTTCTGTATTTGCTCTATTGCTGTTGGCATGTTGATTGAGATCATTGTGATGTACCCCATCCAGCAAAGGGCATACAGAGATGGAATTGACAATTTGTTGGTTCTTCTCATTGGAGGTATCCCAATTGCCATGCCAACAGTCTTGTCTGTGACCATGGCTATTGGGTCTCACCGTTTGTCTGAGCAAGGAGCTATCACCAAGAGGATGACAGCCATTGAAGAAATGGCTGGGATGGATGTTCTCTGCAGTGACAAGACTGGAACTCTTACCCTTAACAAGCTTACTGTGGACAAGACCATGATTGAGGTGTTCGTCCAAGGTATGGACAAGGACACCCTTGTCTTACATGCTGCTAGGGCTTCCAGGGTTGAAAACCAGGATGCTATTGATGCTTCAATTGTTGGGATGCTGGGCGACCCCAAGGAGGCAAGAGCAGGAATCACTGAGGTGCATTTCTTGCCTTTCAATCCTGTGGAGAAGCGCACGGCTATTACCTACATTGATGGTAAAGGCAACTGGCATAGAAGCAGCAAGGGTGCTCCTGAGCAAATTATTGAACTTTGTGGCCTTAAGGGAGAGACTTTGAAAAGGGCCCATGGGATCATTGATCAGTTTGCTAATCGTGGTCTACGTTCATTGGGTGTTAGCCGTCAGACTGTTTCAGAAAAGACTAAGGAAAGTGCTGGAGACTCATGGGAGTTCTTGGGTCTCTTGCCCCTCTTTGACCCTCCAAGGCATGATAGTGCAGAGACTATTCGTCGTGCTCTTGACCTTGGTGTCAATGTTAAGATGATCACCGGTGATCAACTTGCCATTGGAAAAGAAACTGGTCGCAGGCTTGGAATGGGCACCAACATGTATCCTTCATCCTCTCTTCTTGGTGAGAACAAGGACCCTGCCATTGCATCAATCCCAATTGATGAACTCATTGAGAAGGCTGATGGATTTGCTGGAGTCTTCCCCGAACACAAATATGAGATTGTGAAGAGATTGCAAGAGAGAAAGCACATTTGTGGAATGACTGGAGATGGTGTGAATGATGCCCCAGCATTGAAGAAGGCAGACATTGGTATTGCTGTGGCTGATGCAACTGATGCTGCAAGAAGTGCCTCAGACATTGTTTTGACAGAGCCAGGACTAAGTGTTATTGTGAGTGCTGTGTTAACTAGCAGGGCCATCTTCCAGAGAATGAAGAACTACACAATATATGCTGTTTCCATCACTATCCGTATTGTGTTTGGGTTCATGCTTGTAGCTTTAATCTGGAAGTTTGACTTCTCACCTTTCATGGTCCTTATCATTGCCATCTTGAATGATGGAACCATCATGACTATCTCTAAGGACAGGGTGAAGCCATCCCCATTACCTGACTCATGGAAGCTTAAAGAAATCTTTGCTACTGGAGTTATTCTTGGAGCTTACATGGCAATCATTACTGTGGTGTTCTTTTATTTAGTTCATGACACTGATTTCTTCACCAGAGTTTTTGGTGTCAACCCAATTGCAGACAGTGAGGAGCAACTTAACTCAGCTCTTTACCTTCAAGTGAGTATTATTAGTCAGGCACTTATCTTTGTGACCAGGTCAAGGGGTTGGTCTTACATTGAACGCCCAGGCTTTTTGCTTGTTACAGCCTTCTTTTGTGCACAATTGGTGGCTACTATCATTGCTGCACATGCACACTGGGACTTTGCTAGAATCAATGGAATTGGTTGGGGATGGGCTGGAGTAATCTGGATCTTTAGCATTGTTACCTACATTCCTCTTGACATCCTTAAGTTCCTCATCCGTTTGGGATTGTCAGGCAGGGCTTGGGACAACATGCTTGAGAACAAGACTGCTTTCACAACAAAGAAGGACTATGGAAAGGGAGAAAGGGAGGCTCAATGGGCTTTGGCTCAACGCACACTTCATGGTCTCCAAGTTACAGAATCCCATAGGGGCAACCACCATGAACAATCTGAAATTGCTGAGCAAGCTAAGAGGCGTGCTGAGGCTGCCAGGCTCAAAGAGCTCCACACACTCAAGGGACATGTTGAATCTGTGGTGAAATTGAAGGGTCTTGACATTGATACCATCCAACAACACTACACACTCTAA 2736 0.4561 MASDISFEDLKNENLDLENIPVEEVFKQLKCTREGLTTTEGENRLQIFGPNKLEEKTESKFLKFLGFMWNPLSWVMEAAAVMAIALANGGGKPPDWQDLLVLRDGKWSEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKHPGQEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQMVLTSIGNFCICSIAVGMLIEIIVMYPIQQRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTMIEVFVQGMDKDTLVLHAARASRVENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDGKGNWHRSSKGAPEQIIELCGLKGETLKRAHGIIDQFANRGLRSLGVSRQTVSEKTKESAGDSWEFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGENKDPAIASIPIDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVILGAYMAIITVVFFYLVHDTDFFTRVFGVNPIADSEEQLNSALYLQVSIISQALIFVTRSRGWSYIERPGFLLVTAFFCAQLVATIIAAHAHWDFARINGIGWGWAGVIWIFSIVTYIPLDILKFLIRLGLSGRAWDNMLENKTAFTTKKDYGKGEREAQWALAQRTLHGLQVTESHRGNHHEQSEIAEQAKRRAEAARLKELHTLKGHVESVVKLKGLDIDTIQQHYTL 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi694g00028 911 FunFam Plasma membrane ATPase 445 601 - -
Sebi694g00028 911 Pfam haloacid dehalogenase-like hydrolase 290 567 - -
Sebi694g00028 911 Gene3D - 306 453 IPR023299 GO:0000166
Sebi694g00028 911 SFLD p-type atpase 276 605 IPR044492 -
Sebi694g00028 911 SMART Cation_ATPase_N_a_2 16 88 IPR004014 -
Sebi694g00028 911 SFLD C1.7: P-type atpase like 276 605 - -
Sebi694g00028 911 Gene3D - 291 590 IPR023214 -
Sebi694g00028 911 NCBIfam HAD-IC family P-type ATPase 102 329 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi694g00028 911 NCBIfam HAD-IC family P-type ATPase 528 639 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi694g00028 911 PRINTS H+-transporting ATPase (proton pump) signature 410 428 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi694g00028 911 PRINTS H+-transporting ATPase (proton pump) signature 725 746 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi694g00028 911 PRINTS H+-transporting ATPase (proton pump) signature 525 541 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi694g00028 911 PRINTS H+-transporting ATPase (proton pump) signature 553 569 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi694g00028 911 PRINTS H+-transporting ATPase (proton pump) signature 584 609 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi694g00028 911 NCBIfam plasma-membrane proton-efflux P-type ATPase 100 770 IPR006534 GO:0008553|GO:0016020|GO:0120029
Sebi694g00028 911 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 810 IPR023298 -
Sebi694g00028 911 Gene3D - 67 100 - -
Sebi694g00028 911 Gene3D - 182 780 - -
Sebi694g00028 911 SUPERFAMILY HAD-like 290 600 IPR036412 -
Sebi694g00028 911 Gene3D - 101 181 - -
Sebi694g00028 911 FunFam Plasma membrane ATPase 306 453 - -
Sebi694g00028 911 Pfam Cation transporter/ATPase, N-terminus 19 82 IPR004014 -
Sebi694g00028 911 Pfam E1-E2 ATPase 100 273 - -
Sebi694g00028 911 FunFam ATPase 4 plasma membrane-type 537 780 - -
Sebi694g00028 911 FunFam Plasma membrane ATPase 98 181 - -
Sebi694g00028 911 PANTHER CALCIUM-TRANSPORTING ATPASE 18 100 - -
Sebi694g00028 911 SUPERFAMILY Calcium ATPase, transduction domain A 100 194 IPR008250 -
Sebi694g00028 911 Gene3D - 860 911 - -
Sebi694g00028 911 CDD P-type_ATPase_H 35 806 IPR006534 GO:0008553|GO:0016020|GO:0120029
Sebi694g00028 911 ProSitePatterns E1-E2 ATPases phosphorylation site. 296 302 IPR018303 -
Sebi694g00028 911 PRINTS P-type cation-transporting ATPase superfamily signature 470 480 - -
Sebi694g00028 911 PRINTS P-type cation-transporting ATPase superfamily signature 448 459 - -
Sebi694g00028 911 PRINTS P-type cation-transporting ATPase superfamily signature 144 158 - -
Sebi694g00028 911 PRINTS P-type cation-transporting ATPase superfamily signature 294 308 - -
Sebi694g00028 911 PRINTS P-type cation-transporting ATPase superfamily signature 553 572 - -
Sebi694g00028 911 PRINTS P-type cation-transporting ATPase superfamily signature 576 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi694g00028 Sebi-Chr694 321031 326087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi694g00028 1 911 Primary Pumps ATPases AT3G42640 80.696 0.0 1581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi694g00028 K01535 - gmx:100798717 1633.62