Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi694g00015 ATGAGGTTGCACAATCCCCCTATGCTGGACATTCCTTGCTCAAATCCTCAAACAAAGACTGGAAACCACCACAAGGATGATGCAGCATCATCTTTATCTCACCATCTGTCAGGTTTAGAGATGTGCAGGATTCTCCAAATTCACTTTTCAGCAATCAGGATATCTGGAATATACAACATGGTACCTTCTTTCCTCCTGCTAGGACCTAGCAATGCTGCATTGAAGAAAGAAACATATTCTCATATGGATTACTTTGGCTCAACAGAAGACCAACAACTTCAAGCTGTTGCTGAAGATGTAGCAGCTTCTGTTCTGCACCCATGTACTCCTCCAAATCCTAACTTGCAGCCAGAGATGTTTCCTGTGGATGTCAAGAGCAGCCACCAGAAAAGGCAAATTTTGGCTTTCCGTCAGGCAGTTGGTGTTGGACGATTGCAGGTTATAAGAACTGTGACCCTCGAAGAGCTGTCAGAATTGGGTTCTGGTACTTTTGGGACTGTTATCATGGAAAATGGAGGGGATCTGATGTTGCAATCAAGCGAATTACTGATAGCTTTCTATGGTGTTGTGCTTGACGGGCCAGGAGGTTCTGTGGCAACAGTAACTGAGTACATGGCTAATGGTTCTCTACGAAATGCCTTGCAGAGGAATGAAAGGAGTCTTGACAAGCGCAAGCGTCTTTTGATTGCAATGGAGATGTTGCCTTTGTGTTATACAAAATTTACAGGTGGTCCAACTTTAGGTGGTGACTTGGGTCTATCTAAAGTAAAGTGTCAGACACTGATCTCTGGCGGTGTGAGAGGAACTCTACCATGGATGGCTCCAGAACTGCTGAATGGAAGCAGCAGCCTTGTTGATGTGTTTTCATTCGGTATTGTGATGTGGGAACTCTTAACTGGAGAAGAGCCATACGCTGATTTGCACTATGGTGCTATTATAGGTGGGTATTGTGAGCAACACTTTGCGCCAGGGGTTCCTGACTCTTGTGATCTAGAATGGAAATTGCTGATGGAGAAGTGCTGGTCCTCAGAGCCATCAGAGAGACCTTCCTTCACTGAGATTGCAAATGAATTGCGTTCTATGGCATCCAAACGACAAAATCAACAGCTGCATCCCTCTTCCCCCGCACACCCACCTCCACAAATAATTTTCCACAAACTACAACTGCAGGATGCTTAA 1179 0.4504 MRLHNPPMLDIPCSNPQTKTGNHHKDDAASSLSHHLSGLEMCRILQIHFSAIRISGIYNMVPSFLLLGPSNAALKKETYSHMDYFGSTEDQQLQAVAEDVAASVLHPCTPPNPNLQPEMFPVDVKSSHQKRQILAFRQAVGVGRLQVIRTVTLEELSELGSGTFGTVIMENGGDLMLQSSELLIAFYGVVLDGPGGSVATVTEYMANGSLRNALQRNERSLDKRKRLLIAMEMLPLCYTKFTGGPTLGGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVDVFSFGIVMWELLTGEEPYADLHYGAIIGGYCEQHFAPGVPDSCDLEWKLLMEKCWSSEPSERPSFTEIANELRSMASKRQNQQLHPSSPAHPPPQIIFHKLQLQDA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi694g00015 392 Gene3D Transferase(Phosphotransferase) domain 1 137 235 - -
Sebi694g00015 392 ProSiteProfiles Protein kinase domain profile. 74 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi694g00015 392 PANTHER SERINE-THREONINE PROTEIN KINASE 112 360 - -
Sebi694g00015 392 Gene3D Transferase(Phosphotransferase) domain 1 236 377 - -
Sebi694g00015 392 SUPERFAMILY Protein kinase-like (PK-like) 154 380 IPR011009 -
Sebi694g00015 392 MobiDBLite consensus disorder prediction 1 29 - -
Sebi694g00015 392 MobiDBLite consensus disorder prediction 362 381 - -
Sebi694g00015 392 Pfam Protein tyrosine and serine/threonine kinase 250 358 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi694g00015 Sebi-Chr694 183917 186967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi694g00015 86 364 MAP Kinase Kinase Kinase AT3G46920 48.518 1.37e-92 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Sebi694g00015 PK_Tyr_Ser-Thr 3.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi694g00015 - - mtr:11439273 338.191