Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi694g00010 ATGGAGAAAGTTGATAATAGAAGGGTGTCATGGCCTTTGCATTGTGATCTCTTGCATACCCACATGGATAACAGGGAAAAAGGTTCTTCTTTTAGAACTCCCAGAGATCAGATCAGTGCTGAAAATTCGTTTCCTCTGGAAAGCATATGTGAGGATGCAGAGATTGCAGAGAAAAAGCAGAACCTGATAAACTTTGTTCCTACTCTTCGGTCTGGAGAATGGTCTGATATTGGAGGTCGCCCATACATGGAGGATACTCACATATGCATTGGAGACTTGGCAAAGAAATTTGGTTATAATGTACTCTGTGAGGAATCTATTTCCTTTTATGGTAAATGGTCTCATTACACAATGAAAACTCATGCCTTGAAAATTTCCTCTCCTAGAAATGTATTTGATGGACATGGAGGGAAGAGTGCTGCGCAATTTGTCCGTGATCATCTACCAAGGGTGATTGTTGAGGATGCTGACTTTCCTCTGGAACTTGAGAAGGTGGTCACAAGATCATTTTTGGAGACTAATGCAGAGTTTGCAAAAACATGCTCTATTGAGTCTTCCCTGTCTTCTGGTACAACTGCACTGACTGCAATTATATTTGGAAGGTCTTTACTTGTAGCCAATGCTGGAGACTGCCGGGCTGTTTTGTCCCGTTCTGGAGTGGTCATAGAAATGTCAAAAGATCACAGGCCCATGTGCATCAAAGAAAGAATGAGGATTGAGTCCATGGGTGGATTCATTGATGATGGTTACCTGAATGGACAGTTAGGCGTCACTCGTGCTCTAGGTGATTGGCATCTTGAAGGAATGAAGGAAATGAGTGGAAGTGGTGGACCATTGAGTGCTGAGCCTGAACTTAAATTGATGACATTGACCAAAGAAGATGAATTCTTGATAATTGGCAGTGATGGAATCTGGGATGTTTTCCGTAGCCAAAATGCTGTGGATTTTGCTAGAAGGAGGCTTCAAGAGCACAATGATGTGAAACAGTGTTGCAAGGAAATAATAGGGGAAGCAATAAAGAGAGGAGCAACAGACAATTTGACAGTTGTGATGGTATGCTTTCACTCAGATCCACCACCACCTATGGTTGTAGAAAGGCCTAGAGTCAGGAGAAGCATATCTGCTGAGGGACTTCAGAATCTTAAATACCTGTTACAAGGATAG 1164 0.4235 MEKVDNRRVSWPLHCDLLHTHMDNREKGSSFRTPRDQISAENSFPLESICEDAEIAEKKQNLINFVPTLRSGEWSDIGGRPYMEDTHICIGDLAKKFGYNVLCEESISFYGKWSHYTMKTHALKISSPRNVFDGHGGKSAAQFVRDHLPRVIVEDADFPLELEKVVTRSFLETNAEFAKTCSIESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRSGVVIEMSKDHRPMCIKERMRIESMGGFIDDGYLNGQLGVTRALGDWHLEGMKEMSGSGGPLSAEPELKLMTLTKEDEFLIIGSDGIWDVFRSQNAVDFARRRLQEHNDVKQCCKEIIGEAIKRGATDNLTVVMVCFHSDPPPPMVVERPRVRRSISAEGLQNLKYLLQG 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi694g00010 387 SMART PP2C_4 60 352 IPR001932 -
Sebi694g00010 387 FunFam Probable protein phosphatase 2C 22 53 357 - -
Sebi694g00010 387 ProSiteProfiles PPM-type phosphatase domain profile. 70 354 IPR001932 -
Sebi694g00010 387 Gene3D - 51 357 IPR036457 -
Sebi694g00010 387 SUPERFAMILY PP2C-like 61 355 IPR036457 -
Sebi694g00010 387 Pfam Protein phosphatase 2C 130 346 IPR001932 -
Sebi694g00010 387 PANTHER PROTEIN PHOSPHATASE 2C 57 352 IPR015655 GO:0004722|GO:0006470
Sebi694g00010 387 CDD PP2Cc 70 354 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi694g00010 Sebi-Chr694 116585 119151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi694g00010 32 387 PP2C-type Phosphatase Gene Family AT2G25620 53.911 3.27e-129 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Sebi694g00010 PP2C 9.7e-62 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi694g00010 K14803 - gmx:100782648 632.869