Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi693g00026 ATGGCTTTAGAGCAGCAATTATCGCTAGGCTTAGTTGACGGCGAAGCTGACGGAAACACTAACGGCGTGGATGGTCGGCCGGCGTCGACGGATGGCGGAGATGATGGAGGCAAAGCGCCGAGACTGCCACGGTGGACAAGACAGGAGATTCTGGTTCTGATACAGGGAAAGAGAGACGCAGAAAATAAGTTCAGGAGGGGTCGCACCGCAGGATTGCCATTCGGGTCGGGTCAGGTGGAGCCGAAATGGGCATCCGTGTCATCGTACTGCAGAAAGCATGGAGTGAACAGAGGTCCTGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCCGGAGACTACAAGAAGATCAAAGAATGGGAATCTCAGATAAGGGAGGAGACGGAGTCGTTTTGGGTCATGAGAAACGATTTAAGGAGAGAGAGGAAATTGCCTGGATTTTTCGACAAGGAGGTCTATGATATTCTAGATTCAGGGTCGCAGGCGGCGCCGGCGTTAGCTCTAGCTCTGTCATCGCCTGCGGCAACTGTAACAGAGCCATTGGACCAGGGTAAAGGTAAGGACAAGGACAGCAAAAGAGTGGCGGACGAAGCTGAGCCACACATGTATGACAGTAACAGGAGCGCCGCCGGTGAGGATGGTTTATTCTCAGATTTTGAACAAGAAGAAGTGGGTGCCAGTCCCGAGAAGAAGGATGTTTTGGCTTCCTCCAAAGACATTCCTGCTCCTATTCCTATCTCAGAGAAGCAATATCAACCACTCCTCCGTGCCTGCCAAGTTGAAGGTGTGACAAACGAGAAACAGCCAACTTCAAATCCAGAAATGGGATCTACATCTCAAGGAGAACGGAAAAGGAAGCGGTTAGCAACCGATGGAGAGGAGGAAACTTTGCAATATCAATTAATTGATGTCTTAGAAAGAAATGGCAAGATACTAAGCACTCAACTTGAAGCACAAAATATAAATTTCCAGTTGGATCGCGAGCAACGGAAAGACTACGCATGTAACTTGGTTGCTGTACTTGATAAGCTTGCAGATGCTCTAGGGAGAATCGCTGATAAATTGTAG 1065 0.4911 MALEQQLSLGLVDGEADGNTNGVDGRPASTDGGDDGGKAPRLPRWTRQEILVLIQGKRDAENKFRRGRTAGLPFGSGQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIREETESFWVMRNDLRRERKLPGFFDKEVYDILDSGSQAAPALALALSSPAATVTEPLDQGKGKDKDSKRVADEAEPHMYDSNRSAAGEDGLFSDFEQEEVGASPEKKDVLASSKDIPAPIPISEKQYQPLLRACQVEGVTNEKQPTSNPEMGSTSQGERKRKRLATDGEEETLQYQLIDVLERNGKILSTQLEAQNINFQLDREQRKDYACNLVAVLDKLADALGRIADKL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi693g00026 354 MobiDBLite consensus disorder prediction 262 277 - -
Sebi693g00026 354 ProSiteProfiles Myb-like domain profile. 44 110 IPR001005 -
Sebi693g00026 354 MobiDBLite consensus disorder prediction 1 43 - -
Sebi693g00026 354 CDD GT1 43 117 - -
Sebi693g00026 354 MobiDBLite consensus disorder prediction 177 211 - -
Sebi693g00026 354 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 17 354 - -
Sebi693g00026 354 MobiDBLite consensus disorder prediction 181 202 - -
Sebi693g00026 354 Gene3D - 45 115 - -
Sebi693g00026 354 MobiDBLite consensus disorder prediction 261 291 - -
Sebi693g00026 354 Pfam Myb/SANT-like DNA-binding domain 44 133 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi693g00026 Sebi-Chr693 393075 395637 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi693g00026 34 118 Trihelix Transcription Factor Family AT1G76890 27.059 7.99e-07 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sebi693g00026 Myb_DNA-bind_4 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi693g00026 - - pcin:129308058 516.153