Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi693g00011 ATGGAAATTCGGTTGCACAGAGTCCCTGGCAGACTCTTCTTGAATGGTTCCTCCCAGATTGCATCCTTGTTCTGTAAGCAAGGCAGAAAAGGGATCAATCAGGATGCTATGCTTCTTTGGGAGAACTTTTGTTCAAAGGAGGGCACCGTTTTTTGCGGTGTTTTTGATGGGCATGGACCTTGTGGTCACGTGGTTGCCAAGAAAGTCAGGGATTCTTTCCCTTTAAAGCTCATTGCTCAATTGGATTTGCAACCTAACAACGCAAATTGTGACAAACCCACCAATATTAATTTTGTGACACTCAGGGAATCCATTTTGAAGGCTTGTAAGGCTATGGACAAAGAACTGAAACTGCACCTTCAAATTGATTGCTATTGCAGTGGGACTACAGCAGTCACCTTGATCAAACAGGGGCACGACCTTGTTATTGCCAATGTAGGGGACTCAAGAGCTGTATTGGGTACCCGAGATCAACATGATTCTCTCATTGCTCTTCAGTTGACCACTGATCTTAAGCCAAATCTTCCAAGGGAAGCAGAGAGGATAAGGCTTTGTAAAGGAAGGGTGTTTTCCCTTCGGAATGAACCACATGTTGCTCGAGTTTGGCTGCCTAACGTTGATTCACCAGGCCTGGCTATGGCACGGGCCTTTGGAGATTTTTGCCTCAAGGACTTTGGAGTGATATCTGTTCCTGAGGTCTCACATCACCGCCTCACTGACAAGGATGAATTTGTTGTATTAGCCACAGATGGGTCACTTCACTTGTTTGTTGTTTCTCATCTTCTGAGTGAGTCTGAGTCTGAGCAGGTTTGGGATGTTTTATCAAACACAGAAGTTGTGGGCATTGTGGCATCTGCTCCACGGTCTTGTGCAGCTAGAATACTGGTTGAATCAGCTGCTCAAGCATGGAAGACCAAGCTTCCCACTTCAAAGGCAGATGATTGCTCTGTAGTTTGCCTCTTCTTTGATTCAAATTCAGACCTTAAATCACCAAACCATAATAAGGATGACATCAATTGA 1020 0.448 MEIRLHRVPGRLFLNGSSQIASLFCKQGRKGINQDAMLLWENFCSKEGTVFCGVFDGHGPCGHVVAKKVRDSFPLKLIAQLDLQPNNANCDKPTNINFVTLRESILKACKAMDKELKLHLQIDCYCSGTTAVTLIKQGHDLVIANVGDSRAVLGTRDQHDSLIALQLTTDLKPNLPREAERIRLCKGRVFSLRNEPHVARVWLPNVDSPGLAMARAFGDFCLKDFGVISVPEVSHHRLTDKDEFVVLATDGSLHLFVVSHLLSESESEQVWDVLSNTEVVGIVASAPRSCAARILVESAAQAWKTKLPTSKADDCSVVCLFFDSNSDLKSPNHNKDDIN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi693g00011 339 ProSiteProfiles PPM-type phosphatase domain profile. 20 322 IPR001932 -
Sebi693g00011 339 PANTHER PROTEIN PHOSPHATASE 23 320 IPR015655 GO:0004722|GO:0006470
Sebi693g00011 339 Pfam Protein phosphatase 2C 27 251 IPR001932 -
Sebi693g00011 339 SMART PP2C_4 11 320 IPR001932 -
Sebi693g00011 339 CDD PP2Cc 19 322 IPR001932 -
Sebi693g00011 339 Gene3D - 16 330 IPR036457 -
Sebi693g00011 339 SUPERFAMILY PP2C-like 18 324 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi693g00011 Sebi-Chr693 265417 267092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi693g00011 5 326 PP2C-type Phosphatase Gene Family AT1G16220 54.286 1.09e-136 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi693g00011 - - gmx:100816114 455.677