Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi692g00012 ATGGAAGGAGGAGGAGATGCTCCACCTGCTGACACCGTCATGTCGGATGCGGCGCCTCCGCCTCAGCCCGACCCTCAACAACAGCATCAGCAGCAGCCGGCGGTGTCCATGGGGATCGAGAATATTCCGGCAACCCTTAGCCACGGTGGCAGGTTCATTCAGTACAACATATTCGGTAACATATTCGAAGTAACCGCGAAATACAAGCCCCCTATCATGCCCATAGGAAAAGGAGCTTACGGTATCGTCTGTTCGGCTCTGAATTCGGAGACGAATGAGCATGTTGCCATCAAGAAGATTGCCAATGCTTTTGACAACAAAATTGATGCCAAGAGGACCCTCCGTGAAATCAAGCTGCTTCGCCACATGGATCATGAAAACGTGGTCGCAATCAGGGATATAGTGCCACCACCTCAAAGGGAGGTGTTCAATGATGTTTACATTGCATATGAGCTAATGGACACTGACCTTCACCAAATCATTCGATCTAATCAAGCATTATCAGAGGAACACTGTCAGTATTTTCTCTATCAAATCCTTCGTGGGTTGAAGTACATACATTCTGCAAATGTGCTGCATAGGGACTTAAAACCTAGCAACCTTCTCCTGAATGCCAACTGTGACTTAAAAATTTGTGATTTTGGACTGGCTCGTGTCACCTCTGAAACTGATTTTATGACTGAATATGTTGTTACAAGATGGTACCGTGCACCAGAGCTTCTGTTAAACTCATCTGATTACACAGCAGCAATTGATGTATGGTCTGTTGGTTGTATTTTCATGGAACTGATGGATCGAAAGCCTTTATTTCCTGGCAGAGATCATGTGCATCAGTTGCGTCTATTGATGGAGCTGATTGGCACCCCATCAGAAGCTGATTTGGGGTTTCTGAATGAAAATGCTAAGAGATACATTAGGCAACTACCTCTTTACCGCCGCCAATCTTTCCAAGAAAAGTTTCCGCATGTCCATCCTGAAGCTATAGATCTTGTTGAAAAAATGTTGACTTTTGATCCCAGACAAAGAATTACTGTTGAAGATGCACTGGCACACCCCTACTTAACATCTCTGCATGACATCAGTGATGAACCTGTGTGCATGACTCCCTTCAGCTTTGACTTTGAACAACATGCTTTGACTGAGGAACAGATGAAAGAACTCATATACCGAGAGGCTCTAGCATTTAACCCTGAGTATCAGCAGTAG 1206 0.4494 MEGGGDAPPADTVMSDAAPPPQPDPQQQHQQQPAVSMGIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYRRQSFQEKFPHVHPEAIDLVEKMLTFDPRQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPEYQQ 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi692g00012 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Sebi692g00012 401 SMART serkin_6 69 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi692g00012 401 FunFam Mitogen-activated protein kinase 153 381 - -
Sebi692g00012 401 ProSiteProfiles Protein kinase domain profile. 69 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi692g00012 401 SUPERFAMILY Protein kinase-like (PK-like) 74 362 IPR011009 -
Sebi692g00012 401 Gene3D Transferase(Phosphotransferase) domain 1 153 381 - -
Sebi692g00012 401 ProSitePatterns Protein kinases ATP-binding region signature. 75 99 IPR017441 GO:0005524
Sebi692g00012 401 MobiDBLite consensus disorder prediction 1 34 - -
Sebi692g00012 401 Gene3D Phosphorylase Kinase; domain 1 52 391 - -
Sebi692g00012 401 FunFam Mitogen-activated protein kinase 54 163 - -
Sebi692g00012 401 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 67 355 - -
Sebi692g00012 401 CDD STKc_TEY_MAPK 62 397 - -
Sebi692g00012 401 Pfam Protein kinase domain 74 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi692g00012 401 ProSitePatterns MAP kinase signature. 104 207 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi692g00012 Sebi-Chr692 373657 378271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi692g00012 1 401 MAP Kinase Gene Family AT2G43790 86.386 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi692g00012 Pkinase 2.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi692g00012 K14512 - gmx:100805830 762.681