Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi691g00024 ATGTTAGCAAAAGCCCATAATAAAGGGGATGGGTCTAAGTCCCTGTCTAAGATACTGGCAAGATGGAAAGAATATAATGCCCAGCTTGATTCCTCCAATGATGCGGATAAGCCGGTTCGAAAAGTTCCTGCCAAGGGATCGAAGAAGGGCTGCATGAAAGGTAAGGGAGGGCCTGAAAACTCGCGATGTAACTACAGAGGTGTTAGGCAAAGGACTTGGGGGAAATGGGTTGCTGAAATCCGAGAGCCTAACAGAGGGAATAGGCTCTGGCTAGGTACTTTTCCCACTGCCATTGGAGCTGCTCTTGCATATGATGAAGCGGCAAGGGCAATGTATGGTTCTTGTGCCCGCCTTAACTTCCCTAATGTTTCAGTTTCCAGTTTCTCTGAGGAATCTTCAAAAGATTCTACAGTTGCAAATCACTCTGGCTCCTCAATGGCTGTATCAGCAATTACAGAGTCCATGATATCACCAAATAACAATGGGGTAGGCACAGAAGAGGATATTGATATGGAACCCATAACCTTATCCTTAAGTGTAAAACTCGAGAATAGGGAAGGTGAATCGGGGATAAATTCATCCCCTCCTTCTTGCTCATGA 600 0.455 MLAKAHNKGDGSKSLSKILARWKEYNAQLDSSNDADKPVRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIGAALAYDEAARAMYGSCARLNFPNVSVSSFSEESSKDSTVANHSGSSMAVSAITESMISPNNNGVGTEEDIDMEPITLSLSVKLENREGESGINSSPPSCS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi691g00024 199 Pfam AP2 domain 63 113 IPR001471 GO:0003700|GO:0006355
Sebi691g00024 199 MobiDBLite consensus disorder prediction 30 59 - -
Sebi691g00024 199 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Sebi691g00024 199 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Sebi691g00024 199 SUPERFAMILY DNA-binding domain 64 121 IPR016177 GO:0003677
Sebi691g00024 199 CDD AP2 63 122 IPR001471 GO:0003700|GO:0006355
Sebi691g00024 199 MobiDBLite consensus disorder prediction 156 199 - -
Sebi691g00024 199 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 161 - -
Sebi691g00024 199 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Sebi691g00024 199 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Sebi691g00024 199 Gene3D AP2/ERF domain 64 123 IPR036955 GO:0003700|GO:0006355
Sebi691g00024 199 FunFam Ethylene-responsive transcription factor 2 63 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi691g00024 Sebi-Chr691 516844 517443 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi691g00024 8 161 AP2-EREBP Transcription Factor Family AT2G40340 52.532 4.44e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi691g00024 AP2 3.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi691g00024 - K09286 gmx:100527471 345.895