Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi691g00018 ATGCATGTTACTACGTCCTCTCATAGCCCCATGAAAGCTGAGCTAAAGGGAACGTCCATTTCCTTTCAAAACCCTACTCTTTTTAACACACCCCATAATCCTCTTTCAGGAGCACTTAAAGGGTGTCTTGGAAGCCTAGATGGAGCTTGTATTGAGAAGCTCTTAGTCCACTGTGCAAGTGCTCTGGAGAGCAATGATATAACCTTGGCTCAACAAGTCATGTGGGTGCTCAACAACGTTGCTTCACCTGTTGGTGACACTAACCAAAGGCTCACCTCATGGTTCCTAAGGGCACTAATCTCTAGAGCTTCAAGAATTTGCCCTGCTGCAATGAATTTCAAGGGAAGCAATACCATTCAGAGGAGGTTGATGACTGTGACAGAGCTAGCAGGGTATGTTGATCTAATCCCTTGGCATAGATTTGGATTTTGTGTATCCAATAATGAGATTTTTAAAGCAACTATGGGGTTCCAAAAGGTACATGTTCTAGATTTTAGCATAACCCCTTGTATGCAGTGGCCTACTTTTATAGATGCATTAGCTAAAAGACCTGAAGGACCTCCTTCACTTAGAATCACTGTGCCATCTTTTAGGCCACCAGTCCCTCCTTTAGTCAATATATCAATACATGAGGTTGGCTTGCGTTTAGGTAATTTTGCCAAGTTCAGGGATGTCCCTTTTGAGTTCAATGTTATTGGAAACACAACTCAATTAACATCTTCAGAATTGAGCAATGAAACAACCACCTTTCATTTTGAATCTCTGTTAAGTCTCTTGAATCCTACTATGCTAAACCTTAGGGAAGATGAAGCTTTGGTCATAAATTGCCAAAATTGGCTACGTTATTTGTCTGATGAAAGAAAGGGAAGTCACCAAAACCTTTCCCTTAGGGATGCTTTTCTGAGTCTAGTAAAAGGCCTTAACCCCCAGATTGTGCTCTTGGTTGATGAGGATTGTGATCTTAGTGCATCCAGTCTCACATCAAGAATTACCTCTTGTTTCAACCATTTATGGATACCCTTTGATGCATTGGACACTTTTTTGCCTAAGGATAGTTGTCAGAGGACAGAGTTTGAATCAGATATAGGACAGAAAATTGAGAACATCATAAGCTTTGAAGGGCATCAAAGGATAGAGAGATTGGAGTCTGGGATGCAAATGTCCCAAAGAATGAAAAATGCAGGTTACTTTAGTCTTCCATTTTGTGATGAAACTGTTAGAGAAGTTAAAGCTTTGCTAGATGAACATGCTAGTGGATGGGGGATGAAAAGGGAAGAAGGTATGTTAGTTCTCACATGGAAAGGAAACAGCTGTGTGTTTGTGACAGCTTGGGTCCCCAGTGAAATGAGGGATCATCATATTGGTATGGACGCAAGTTTGTCTTAA 1386 0.4105 MHVTTSSHSPMKAELKGTSISFQNPTLFNTPHNPLSGALKGCLGSLDGACIEKLLVHCASALESNDITLAQQVMWVLNNVASPVGDTNQRLTSWFLRALISRASRICPAAMNFKGSNTIQRRLMTVTELAGYVDLIPWHRFGFCVSNNEIFKATMGFQKVHVLDFSITPCMQWPTFIDALAKRPEGPPSLRITVPSFRPPVPPLVNISIHEVGLRLGNFAKFRDVPFEFNVIGNTTQLTSSELSNETTTFHFESLLSLLNPTMLNLREDEALVINCQNWLRYLSDERKGSHQNLSLRDAFLSLVKGLNPQIVLLVDEDCDLSASSLTSRITSCFNHLWIPFDALDTFLPKDSCQRTEFESDIGQKIENIISFEGHQRIERLESGMQMSQRMKNAGYFSLPFCDETVREVKALLDEHASGWGMKREEGMLVLTWKGNSCVFVTAWVPSEMRDHHIGMDASLS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi691g00018 461 ProSiteProfiles GRAS family profile. 42 445 IPR005202 -
Sebi691g00018 461 Pfam GRAS domain family 52 444 IPR005202 -
Sebi691g00018 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 51 440 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi691g00018 Sebi-Chr691 420792 422177 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi691g00018 18 446 GRAS Transcription Factor Family AT3G49950 43.836 4.59e-115 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi691g00018 GRAS 9.2e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi691g00018 - - gmx:100802093 810.831