Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi690g00025 ATGGGAATATATCTCAGTACTCCTAAAACAGAAAAGTTTTCTGAAGATGGTGAAAACGACCGTCTTAGATATGGTTTATCATCCATGCAAGGATGGCGTGCAACAATGGAAGATGCTCATGCTGCATATACTGATCTGGACGAGTCCACTTCGTTTTTCGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCCAAGTTCTGTGCTAAGTTTCTTCACCAACAGGTGCTCAAAAGTGAAGCATACTTAGTTGGAGATATAGGAACCGCTCTTCAGAAAGCTTTTTTAAGAATGGATGAGATGATGCGTGGTCAAAAGGGATGGAGGGAATTATCAATCTTGGGGGATAAGATAAACAAGTTTACTGGGATGATAGAAGGGTTGATTTGGTCTCCACGAGGCAGTGATGGTAATAACCAAGTTGATGATTGGGCTTCTGAGGAGGGGCCTCACTCAGATTTTGCTGGACCAACTTCAGGAAGCACTGCCTGTGTTGCAGTTATTAGAAATGGCCAACTTGTCGTTGCAAATGCTGGTGATTCACGTTGTGTACTATCTAGGAAGGGTCAGGCATACAATTTGTCTAGAGACCACAAACCTGATCTTGAAATTGAGAGCCAAAGAATCTTAAGAGCTGGTGGTTTTATTCATGCAGGACGAATTAATGGCAGTTTAAATCTTGCAAGAGCTATCGGTGACATGGAATTTAAACAGAATAAATTTCTCCCGCCTGAGAAACAAATTGTAACTGCCAATCCAGATATAAACACTGTTGAGCTTTGTGATGAAGATGAATTTATGGTGCTAGCTTGTGATGGCATATGGGATTGCATGTCAAGCCAACAATTGGTAGATTTTGTTCATGAACAATTGCGCTCGGAAACAAAACTTTCTGCAGTGTGTGAAAGAGTACTTGACCGGTGTTTGGCACCATCAACAGCTAATGGCGATGGATGTGATAACATGACTATGATCTTGGTGCAGTTCAAAAAACCTGCTCAGTCTAGTGCACCAGCAGAAGAGCAATCCTCATCAAATGGACAAGCTGAAACAGAACCAAAACTGGAAAGAAGTGAAATTTAA 1083 0.4164 MGIYLSTPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAYTDLDESTSFFGVYDGHGGKVVAKFCAKFLHQQVLKSEAYLVGDIGTALQKAFLRMDEMMRGQKGWRELSILGDKINKFTGMIEGLIWSPRGSDGNNQVDDWASEEGPHSDFAGPTSGSTACVAVIRNGQLVVANAGDSRCVLSRKGQAYNLSRDHKPDLEIESQRILRAGGFIHAGRINGSLNLARAIGDMEFKQNKFLPPEKQIVTANPDINTVELCDEDEFMVLACDGIWDCMSSQQLVDFVHEQLRSETKLSAVCERVLDRCLAPSTANGDGCDNMTMILVQFKKPAQSSAPAEEQSSSNGQAETEPKLERSEI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi690g00025 360 SMART PP2C_SIG_2 28 329 IPR001932 -
Sebi690g00025 360 Gene3D - 1 330 IPR036457 -
Sebi690g00025 360 SMART PP2C_4 13 327 IPR001932 -
Sebi690g00025 360 CDD PP2Cc 23 329 IPR001932 -
Sebi690g00025 360 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Sebi690g00025 360 MobiDBLite consensus disorder prediction 335 351 - -
Sebi690g00025 360 PANTHER PROTEIN PHOSPHATASE 2C 18 328 IPR015655 GO:0004722|GO:0006470
Sebi690g00025 360 MobiDBLite consensus disorder prediction 330 360 - -
Sebi690g00025 360 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Sebi690g00025 360 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Sebi690g00025 360 Pfam Protein phosphatase 2C 155 315 IPR001932 -
Sebi690g00025 360 Pfam Protein phosphatase 2C 23 104 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi690g00025 Sebi-Chr690 491214 497079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi690g00025 1 341 PP2C-type Phosphatase Gene Family AT2G25070 76.833 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi690g00025 K17499 - qsa:O6P43_015776 642.884