Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi690g00013 ATGGGTTATCTCAATTCAGTTTTGTCCTCTTCAAGCCAGATTCATGCTACCAATGACTCACCTCCTGTGAGTGGTGGCGGTCTCAGTCACAATGGCAAATTCAGCTATGGGTATGCTAGCTCTCCTGGCAAGAGATCTTCCATGGAAGATTTTTATGAGACGAGAATTGATGGTGTTGATGGTGAAATTGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGTGGTGCTCGTGCTGCTGAGTATGTCAAGAAAAACCTGTTTAGTAATTTAATCAATCATCCAAAATTCATTTCTGATACCAAATCAGCAATAGCTGATGCATATAACCATACCGATTCTGAATTTCTGAAATCAGAAAATAGTCATAACAGAGATGCTGGCTCTACTGCTTCCACTGCCATTCTAGTTGGTGACCGCTTGCTTGTTGCAAATGTTGGGGACTCCAGGGCTGTCATATGCAGGGGTGGTAATGCAATTGCTGTTTCTAGAGATCACAAACCAGACCAAACTGATGAGAGGCAAAGGATTGAAGATGCAGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGACCCAGAAATCCAGGAAGAGAAAGTTGACAGTTCTCTTGAGTTTCTTATTTTGGCCAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTTGCTATGATTAAACCAATTGAGGATGCAGAGGAAGCAGCAAAGAGACTGATGCAAGAAGCCTCTCAGAGAGGTAGTGCTGACAACATCACTTGTGTTGTTGTTCGTTTTGTCATGAACCAAGGCACCTCTTCCCATAGCCACAGCAACACCTCTTCTCATGGCCATAGCAACACCTCTTCTATTGGCCACAACAACACCTCTTCTCATGGCCATAGCAACACCTCTTCTCAAGGCCACAGCAACACCTCTTCTATTGGCCACAACAACACCTCTTCTCATGGCCATAGCAACACCTCTTCTCAAGGCCACAGCAACACCTCTTCTATTGGCCACCGCAACACCTCTTCTCATGGCCACAACAACACCTCTTCTGATGGCCACAGTAACACCTCTTCTATTGGCCACAGCAACACCTCTTCTCATGGCCACAGCAACACCTTAGAAAATGGGGCAAGGAATTTTCATACCTCTAAAGCTTGGAGAGCACCCAAGGAAGATGCGATCAAGATTAACTGTGATGCAACCTTCAAACCTCATTTTGGATATGCTGCCATAGCTGCAAGTGCGAGGGATTCAGCTAGGACCATCCTCTCTGTTTCGTCTAAGCTCATCCCAGCGACATCCGCGCTTATAGCAGAAGCTCTTGCTGTCAGGGAAGGGGTGTCTCTCACACCCGGAAGCTACAGCTACAGAACCTTGATTGAATCAGATAACCTTGCTGTCATAAAAGCCATAAGAGGAGGAAATCAACAGTGTTCTATGGTTCAAATGGTTAAAGACATCCAAATGTCAAGTAGTCTTACACCTAATTGTGGTTTCCTTTGGACGCACAGAGAAAGGAACCAACTTGCGCACTCCATCACTCAAGCAATGCTACTCACTCGGGACGGAATCCATTCCATCTCGACCATCCCAAGCAGATGCAGAGACACCGCATCCCTGGACGAATGTGGAAGATAA 1695 0.4584 MGYLNSVLSSSSQIHATNDSPPVSGGGLSHNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKKNLFSNLINHPKFISDTKSAIADAYNHTDSEFLKSENSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMQEASQRGSADNITCVVVRFVMNQGTSSHSHSNTSSHGHSNTSSIGHNNTSSHGHSNTSSQGHSNTSSIGHNNTSSHGHSNTSSQGHSNTSSIGHRNTSSHGHNNTSSDGHSNTSSIGHSNTSSHGHSNTLENGARNFHTSKAWRAPKEDAIKINCDATFKPHFGYAAIAASARDSARTILSVSSKLIPATSALIAEALAVREGVSLTPGSYSYRTLIESDNLAVIKAIRGGNQQCSMVQMVKDIQMSSSLTPNCGFLWTHRERNQLAHSITQAMLLTRDGIHSISTIPSRCRDTASLDECGR 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi690g00013 564 MobiDBLite consensus disorder prediction 287 395 - -
Sebi690g00013 564 PANTHER PROTEIN PHOSPHATASE 27 280 IPR015655 GO:0004722|GO:0006470
Sebi690g00013 564 SMART PP2C_4 25 279 IPR001932 -
Sebi690g00013 564 SUPERFAMILY Ribonuclease H-like 411 532 IPR012337 -
Sebi690g00013 564 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Sebi690g00013 564 CDD PP2Cc 34 281 IPR001932 -
Sebi690g00013 564 ProSitePatterns PPM-type phosphatase domain signature. 66 74 IPR000222 GO:0043169
Sebi690g00013 564 SMART PP2C_SIG_2 30 281 IPR001932 -
Sebi690g00013 564 CDD RNase_H_like 415 532 IPR044730 -
Sebi690g00013 564 FunFam probable protein phosphatase 2C 59 27 285 - -
Sebi690g00013 564 Gene3D - 412 540 IPR036397 GO:0003676
Sebi690g00013 564 Gene3D - 27 286 IPR036457 -
Sebi690g00013 564 ProSiteProfiles PPM-type phosphatase domain profile. 35 281 IPR001932 -
Sebi690g00013 564 Pfam Reverse transcriptase-like 416 533 IPR002156 GO:0003676|GO:0004523
Sebi690g00013 564 Pfam Protein phosphatase 2C 64 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi690g00013 Sebi-Chr690 285268 291990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi690g00013 1 299 PP2C-type Phosphatase Gene Family AT4G31750 88.372 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi690g00013 K17506 - gmx:100797070 534.643