Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi690g00010 ATGGCCTCTAAGCTCTGCGATTACTGCAAGTCCGCCACAGCCACGCTCTACTGCCGCCCTGACTCCGCCTTTCTCTGCGGCGCCTGTGACTCCAAGGCTGACGCCGCTTCCCTCTGCCTCGCCTGTGACCAAGACATCCACTCTGCTAACCCTCTCGCTAGCCGCCACGAGCGTTTCCCTGTCACTCCAATCTTCGAATCCGTCCACTCCGTCAAGTCATCCTCCACCGCTAACTTCCTCGATCACCACCACTTCTTCTCCGATGATGCAGATGCAGATGCAGAAGAAGCCGAGGCTGCTTCCTGGTTGCTTCCAGCACCTAAGACAGATCTGTTCTCCGAAAACGAACCTCTTACCTTCATAGATCTGGATTACGGTCTTGATCCCAAAGCTGAACAGAAAAGCGACGGAGTGGTTCCTGTATCATCTTCGTCGATGGAGGTTGGGGTTGTGCCGGATGGGAGCACCGCATCGGAGATATCGAACTGCAGCTATGGCAAGGCGGCGGATAGGGAAGCGAGGGTGTTGAGGTACAGGGAGAAGAGGAAGAATCGAAGGTTCGAGAAGACTATTCGTTACGCTTCACGGAAAGCCTATGCGGAAACCAGACCTAGAATCAAAGGCAGGTTCGCCAAACGCTCTGATGCCGTCGTCGACCATCTTGGTGGATACGGCGTCGTTCCAACCTGTTGA 693 0.5498 MASKLCDYCKSATATLYCRPDSAFLCGACDSKADAASLCLACDQDIHSANPLASRHERFPVTPIFESVHSVKSSSTANFLDHHHFFSDDADADAEEAEAASWLLPAPKTDLFSENEPLTFIDLDYGLDPKAEQKSDGVVPVSSSSMEVGVVPDGSTASEISNCSYGKAADREARVLRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRFAKRSDAVVDHLGGYGVVPTC 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi690g00010 230 ProSiteProfiles Zinc finger B-box type profile. 1 61 IPR000315 GO:0008270
Sebi690g00010 230 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 6 216 IPR045281 GO:0009909
Sebi690g00010 230 Pfam CCT motif 171 213 IPR010402 GO:0005515
Sebi690g00010 230 CDD Bbox1_BBX-like 5 61 - -
Sebi690g00010 230 SMART bboxneu5 1 61 IPR000315 GO:0008270
Sebi690g00010 230 ProSiteProfiles CCT domain profile. 171 213 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi690g00010 Sebi-Chr690 228332 229296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi690g00010 1 229 C2C2-CO-like Transcription Factor Family AT5G24930 41.873 1.06e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Sebi690g00010 CCT 1.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi690g00010 - - gmx:100804201 313.923